RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 BCL2L1Q07817 233 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 ZNF177Q13360 481 aaPredicted RBP9.61□□□□□ -0.87
VPS11-207ENST00000620429 NFATC2Q13469 925 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 DDX39BQ13838 428 aaKnown RBP9.61□□□□□ -0.87
VPS11-207ENST00000620429 CRB2Q5IJ48 1285 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 NCMAPQ5T1S8 102 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 RNF219Q5W0B1 726 aaPredicted RBP9.61□□□□□ -0.87
VPS11-207ENST00000620429 FRG2Q64ET8 278 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 SFXN4Q6P4A7 337 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 SPNS3Q6ZMD2 512 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 NPAS4Q8IUM7 802 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 OR5T3Q8NGG3 340 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 TFGQ92734 400 aaPredicted RBP9.61□□□□□ -0.87
VPS11-207ENST00000620429 C3orf49Q96BT1 292 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 ZNF582Q96NG8 517 aaPredicted RBP9.61□□□□□ -0.87
VPS11-207ENST00000620429 FRG2BQ96QU4 278 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 CLCC1Q96S66 551 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 PIGQQ9BRB3 760 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 RSRP1Q9BUV0 290 aa9.61□□□□□ -0.87
VPS11-207ENST00000620429 COL25A1Q9BXS0 654 aaPredicted RBP9.61□□□□□ -0.87
VPS11-207ENST00000620429 RCC2Q9P258 522 aaKnown RBP9.61□□□□□ -0.87
VPS11-207ENST00000620429 A0A0A6YYC8 382 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 I3L1I5 382 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 J3KTA2 159 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 GAPDHSO14556 408 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 EMC8O43402 210 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 PCDH7O60245 1069 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 CRHP06850 196 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 MSX1P28360 303 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 SRSF3P84103 164 aaKnown RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 HGFACQ04756 655 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 INSL4Q14641 139 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 RGNQ15493 299 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 RNASE12Q5GAN4 147 aaKnown RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 NKAPLQ5M9Q1 402 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 RAB12Q6IQ22 244 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 JMJD6Q6NYC1 403 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 C6orf120Q7Z4R8 191 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 PARGQ86W56 976 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 C1QL4Q86Z23 238 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 CCDC54Q8NEL0 328 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 OR5M1Q8NGP8 315 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 OR1J4Q8NGS1 313 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 OR2G2Q8NGZ5 317 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 ZFP3Q96NJ6 502 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 PINK1Q9BXM7 581 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 SFXN1Q9H9B4 322 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 GAR1Q9NY12 217 aaKnown RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 KANTRA0A1W2PQU2 76 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 IFITM10A6NMD0 228 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 MAN2B1O00754 1011 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 BCL2L11O43521 198 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 SH3BGRLO75368 114 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 CLDN11O75508 207 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 RGS9O75916 674 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 PTBP3O95758 552 aaKnown RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 TRBC1P01850 177 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 KLKB1P03952 638 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 ADH1AP07327 375 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 ETFAP13804 333 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 CELP19835 753 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 ACRV1P26436 265 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 SHC1P29353 583 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 SLC11A2P49281 568 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 LSM6P62312 80 aaKnown RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 HSD11B2P80365 405 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 ARF5P84085 180 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 ZXDCQ2QGD7 858 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 C18orf63Q68DL7 685 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 MTFR2Q6P444 385 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 PLBD1Q6P4A8 553 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 UBE2R2Q712K3 238 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 LRRC70Q7Z2Q7 622 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 FBXO15Q8NCQ5 510 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 BEND2Q8NDZ0 799 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 OR8J2Q8NGG1 315 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 OR9A2Q8NGT5 310 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 NRIP2Q9BQI9 281 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 WDR13Q9H1Z4 485 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 BCO1Q9HAY6 547 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 IL26Q9NPH9 171 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 MBD1Q9UIS9 605 aaPredicted RBP9.6□□□□□ -0.87
VPS11-207ENST00000620429 CORO2BQ9UQ03 480 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 SCN5AQ14524 2016 aa9.6□□□□□ -0.87
VPS11-207ENST00000620429 UBE2QL1A1L167 161 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 COCHO43405 550 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 TLX2O43763 284 aaPredicted RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 OR8G3PP0DMU2 310 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 EPXP11678 715 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 CD79AP11912 226 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 RAB5AP20339 215 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 PPIBP23284 216 aaKnown RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 AVPR2P30518 371 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 ANXA11P50995 505 aaKnown RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 CCR8P51685 355 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 LUMP51884 338 aaPredicted RBP9.59□□□□□ -0.87
VPS11-207ENST00000620429 AP3S2P59780 193 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 EFNB1P98172 346 aa9.59□□□□□ -0.87
VPS11-207ENST00000620429 CHIT1Q13231 466 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms