RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 LSM2Q9Y333 95 aaKnown RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 MED12Q93074 2177 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 CSMD2Q7Z408 3487 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 ICE1Q9Y2F5 2266 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 DNAJC13O75165 2243 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 LOC100506127A0A0U1RQW1 187 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 A0A1W2PQ72 361 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 URADA6NGE7 173 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 METTL15A6NJ78 407 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 DUXAA6NLW8 204 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 CPSF4LA6NMK7 179 aaKnown RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 CYR61O00622 381 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 ZNHIT1O43257 154 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TLX2O43763 284 aaPredicted RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 FGF17O60258 216 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 THY1P04216 161 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 CPMP14384 443 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 PORP16435 677 aaPredicted RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TLX1P31314 330 aaPredicted RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 PRKAR1BP31321 381 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 PCYT1AP49585 367 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 PSMD7P51665 324 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 RRADP55042 308 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 RAB38P57729 211 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TAS2R41P59536 307 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 HOXC5Q00444 222 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 ZNF91Q05481 1191 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 KLRB1Q12918 225 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 MRPL49Q13405 166 aaKnown RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 NSDHLQ15738 373 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 INAQ16352 499 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 SSX1Q16384 188 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 DUSP5Q16690 384 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TSTQ16762 297 aaKnown RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 ARHGAP11BQ3KRB8 267 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 ZNF628Q5EBL2 1059 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 SLC25A30Q5SVS4 291 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 FHL5Q5TD97 284 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 MEDAGQ5VYS4 303 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TYW3Q6IPR3 259 aaKnown RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 USP43Q70EL4 1123 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 NDUFAF7Q7L592 441 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 SNX29P2Q8IUI4 249 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 NKAIN4Q8IVV8 208 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 SAMD14Q8IZD0 417 aaPredicted RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 FAM26EQ8N5C1 309 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TEX19Q8NA77 164 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 OR52P1PQ8NH57 321 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 MCFD2Q8NI22 146 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 THAP3Q8WTV1 239 aaPredicted RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 SLC9A6Q92581 669 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TMEM80Q96HE8 168 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 PTCHD1Q96NR3 888 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 OPALINQ96PE5 141 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 CHCHD6Q9BRQ6 235 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 CDADC1Q9BWV3 514 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 NXF2Q9GZY0 626 aaKnown RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 DSN1Q9H410 356 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 EGLN3Q9H6Z9 239 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 MTHFD2LQ9H903 347 aaPredicted RBP4.88□□□□□ -1.63
GTDC1-220ENST00000618778 TBCCD1Q9NVR7 557 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 RHBDL2Q9NX52 303 aa4.88□□□□□ -1.63
GTDC1-220ENST00000618778 GTF3C1Q12789 2109 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 CENPVL1A0A0U1RR11 272 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 TCRBV16S1A1N1A0A5B0 115 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 J3QKU1 62 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 CCRL2O00421 344 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 ZNF354AO60765 605 aaPredicted RBP4.87□□□□□ -1.63
GTDC1-220ENST00000618778 WDPCPO95876 746 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 OCM2P0CE71 109 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 OCMP0CE72 109 aaPredicted RBP4.87□□□□□ -1.63
GTDC1-220ENST00000618778 ACP2P11117 423 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 RNH1P13489 461 aaKnown RBP4.87□□□□□ -1.63
GTDC1-220ENST00000618778 GSTM3P21266 225 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 MSX1P28360 303 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 RANBP1P43487 201 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 OMPP47874 163 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 NR0B1P51843 470 aaKnown RBP4.87□□□□□ -1.63
GTDC1-220ENST00000618778 GAS1P54826 345 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 SLC26A5P58743 744 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 ST3GAL3Q11203 375 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 TRAM2Q15035 370 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 RGS21Q2M5E4 152 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 ZNF404Q494X3 552 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 SYT14P1Q58G82 188 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 EXOSC6Q5RKV6 272 aaKnown RBP4.87□□□□□ -1.63
GTDC1-220ENST00000618778 CCNJQ5T5M9 372 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 RNLSQ5VYX0 342 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 PAQR6Q6TCH4 344 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 QSOX2Q6ZRP7 698 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 LSRQ86X29 649 aaPredicted RBP4.87□□□□□ -1.63
GTDC1-220ENST00000618778 ZNF295-AS1Q8N0V1 137 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 SLC34A3Q8N130 599 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 BEST3Q8N1M1 668 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 NANOGP1Q8N7R0 232 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 APCDD1LQ8NCL9 501 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 NFAM1Q8NET5 270 aaPredicted RBP4.87□□□□□ -1.63
GTDC1-220ENST00000618778 OR8D4Q8NGM9 314 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 GNPDA2Q8TDQ7 276 aa4.87□□□□□ -1.63
GTDC1-220ENST00000618778 NR4A3Q92570 626 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms