RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 A8MVM7 634 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 H0Y3Z8 333 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 J3QKU1 62 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 EIF1AYO14602 144 aaKnown RBP17.71■□□□□ 0.43
UPF3A-211ENST00000618700 PRRG2O14669 202 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 STSP08842 583 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 UMPSP11172 480 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 ITGA2P17301 1181 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 FUT4P22083 530 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 UQCRFS1P47985 274 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 CLK1P49759 484 aaKnown RBP17.71■□□□□ 0.43
UPF3A-211ENST00000618700 SRYQ05066 204 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 FAM98BQ52LJ0 330 aaKnown RBP17.71■□□□□ 0.43
UPF3A-211ENST00000618700 CYP4Z1Q86W10 505 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 ATCAYQ86WG3 371 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 DOLPP1Q86YN1 238 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 OR2V1Q8NHB1 315 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 STK35Q8TDR2 534 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 DDIT4LQ96D03 193 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 MPP4Q96JB8 637 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 ARL5BQ96KC2 179 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 DHRS1Q96LJ7 313 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 RAB3IPQ96QF0 476 aaPredicted RBP17.71■□□□□ 0.43
UPF3A-211ENST00000618700 TUBA1CQ9BQE3 449 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 MAN2C1Q9NTJ4 1040 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 TINAGQ9UJW2 476 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 FIGNL2A6NMB9 653 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 TNFSF11O14788 317 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 WDR1O75083 606 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 RAP2AP10114 183 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 TFPIP10646 304 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 HOXB6P17509 224 aaKnown RBP17.7■□□□□ 0.42
UPF3A-211ENST00000618700 GNLYP22749 145 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 SLC7A1P30825 629 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 ERFP50548 548 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 EGR4Q05215 589 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 CHRNB3Q05901 458 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 ST3GAL3Q11203 375 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 ACSF3Q4G176 576 aaPredicted RBP17.7■□□□□ 0.42
UPF3A-211ENST00000618700 PAPD5Q8NDF8 572 aaKnown RBP17.7■□□□□ 0.42
UPF3A-211ENST00000618700 PIK3C3Q8NEB9 887 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 OR10D3Q8NH80 312 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 ZPLD1Q8TCW7 415 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 OR5B2Q96R09 309 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 PIP5K1AQ99755 562 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 TMEM43Q9BTV4 400 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 POTEKPQ9BYX7 375 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 RHCGQ9UBD6 479 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 HDGFL3Q9Y3E1 203 aa17.7■□□□□ 0.42
UPF3A-211ENST00000618700 ERICH4A6NGS2 130 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 AHRRA9YTQ3 701 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 DIRAS1O95057 198 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 MT-ND1P03886 318 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 GABRA1P14867 456 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 IFNA8P32881 189 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 PTGER4P35408 488 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 CA7P43166 264 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 MYBPHQ13203 477 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 HBMQ6B0K9 141 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 ZNF585AQ6P3V2 769 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 NKAIN4Q8IVV8 208 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 RNF217Q8TC41 542 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 RELTQ969Z4 430 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 SLCO4A1Q96BD0 722 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 UCN2Q96RP3 112 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 ZNF347Q96SE7 839 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 FNDC11Q9BVV2 318 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 TP63Q9H3D4 680 aaPredicted RBP17.69■□□□□ 0.42
UPF3A-211ENST00000618700 ANKRD19PQ9H560 264 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 NMNAT1Q9HAN9 279 aaPredicted RBP17.69■□□□□ 0.42
UPF3A-211ENST00000618700 OSGIN2Q9Y236 505 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 FAM32AQ9Y421 112 aaKnown RBP17.69■□□□□ 0.42
UPF3A-211ENST00000618700 FAM215AQ9Y5M1 114 aa17.69■□□□□ 0.42
UPF3A-211ENST00000618700 FASNP49327 2511 aaKnown RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 A0A1W2PNR3 127 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 A0A1W2PRQ8 180 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 CLCA1A8K7I4 914 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 PYCARD-AS1I3L0S3 204 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 FZD7O75084 574 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 HOXD4P09016 255 aaPredicted RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 ACVR2AP27037 513 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 RBM34P42696 430 aaKnown RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 EIF1AXP47813 144 aaKnown RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 ACTR3P61158 418 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 RPS3AP61247 264 aaKnown RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 DGCR6Q14129 220 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 KPNB1Q14974 876 aaKnown RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 TRAM2Q15035 370 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 C1orf140Q5VVS0 124 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 C1QL3Q5VWW1 255 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 RTL6Q6ICC9 239 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 TMPPEQ6ZT21 453 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 KTI12Q96EK9 354 aaPredicted RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 DUS3LQ96G46 650 aaKnown RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 ZNF845Q96IR2 970 aaPredicted RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 RSRC1Q96IZ7 334 aaKnown RBP17.68■□□□□ 0.42
UPF3A-211ENST00000618700 PTDSS2Q9BVG9 487 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 CHID1Q9BWS9 393 aa17.68■□□□□ 0.42
UPF3A-211ENST00000618700 SRXN1Q9BYN0 137 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms