RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 POLE3Q9NRF9 147 aa11.38□□□□□ -0.59
CIITA-212ENST00000618207 FGF21Q9NSA1 209 aa11.38□□□□□ -0.59
CIITA-212ENST00000618207 CTSFQ9UBX1 484 aa11.38□□□□□ -0.59
CIITA-212ENST00000618207 PTP4A3O75365 173 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 CLPSP04118 112 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ITPKBP27987 946 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 GABRA5P31644 462 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ERVK-25P63136 954 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ZNF141Q15928 474 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 RNLSQ5VYX0 342 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 OGFOD3Q6PK18 319 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 SSX6Q7RTT6 188 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 C17orf82Q86X59 251 aaPredicted RBP11.37□□□□□ -0.59
CIITA-212ENST00000618207 GID4Q8IVV7 300 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ZNF485Q8NCK3 441 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 OR6K6Q8NGW6 343 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ZNF563Q8TA94 476 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ZPLD1Q8TCW7 415 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 SLC2A12Q8TD20 617 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 KISS1RQ969F8 398 aaPredicted RBP11.37□□□□□ -0.59
CIITA-212ENST00000618207 NMNAT3Q96T66 252 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 PLEKHB1Q9UF11 243 aaPredicted RBP11.37□□□□□ -0.59
CIITA-212ENST00000618207 A3GALT2U3KPV4 340 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 NPIPB9F8W1W9 429 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 H0YIG0 161 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 SCDO00767 359 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 FOSL2P15408 326 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 E2F1Q01094 437 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 SERTAD2Q14140 314 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 BAK1Q16611 211 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 QSOX2Q6ZRP7 698 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 TMPRSS9Q7Z410 1059 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 PLXDC1Q8IUK5 500 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 CLDN22Q8N7P3 220 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ZSCAN1Q8NBB4 408 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 HOXB13Q92826 284 aaPredicted RBP11.37□□□□□ -0.59
CIITA-212ENST00000618207 HPS1Q92902 700 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 SGTBQ96EQ0 304 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 C4orf36Q96KX1 117 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 ZNF285Q96NJ3 590 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 TSSK2Q96PF2 358 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 CDX2Q99626 313 aaPredicted RBP11.37□□□□□ -0.59
CIITA-212ENST00000618207 NUDT9Q9BW91 350 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 WNT16Q9UBV4 365 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 PRODH2Q9UF12 536 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 EXOGQ9Y2C4 368 aaKnown RBP11.37□□□□□ -0.59
CIITA-212ENST00000618207 SLC35A3Q9Y2D2 325 aa11.37□□□□□ -0.59
CIITA-212ENST00000618207 SAGE2PA6NJ88 616 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ELOA3DA6NLF2 546 aaPredicted RBP11.36□□□□□ -0.59
CIITA-212ENST00000618207 ICOSLGO75144 302 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 IGHA1P01876 353 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 F13BP05160 661 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 PEPDP12955 493 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 HK1P19367 917 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 SLC6A6P31641 620 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 PYCR1P32322 319 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 PSPHP78330 225 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 FHL1Q13642 323 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ELOA3BQ3SY89 546 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 TP53I3Q53FA7 332 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 OTPQ5XKR4 325 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 VASNQ6EMK4 673 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 OR5M10Q6IEU7 315 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ELOA3Q8NG57 546 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 OR13C5Q8NGS8 318 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 OR2I1PQ8NGU4 316 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ZNRF4Q8WWF5 429 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 SMPDL3BQ92485 455 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 C3orf49Q96BT1 292 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 CHRDQ9H2X0 955 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 SIT1Q9Y3P8 196 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 CMAHPQ9Y471 501 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 A0A1B0GVC2 190 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 A6NIN4 97 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 FAM47E-STBD1D6RA91 191 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 POLR1CO15160 346 aaPredicted RBP11.36□□□□□ -0.59
CIITA-212ENST00000618207 UTS2O95399 124 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 FBLP22087 321 aaKnown RBP11.36□□□□□ -0.59
CIITA-212ENST00000618207 PRKACBP22694 351 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 CTBP2P56545 445 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ZNF181Q2M3W8 571 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 LSMEM1Q8N8F7 131 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 MOSPD2Q8NHP6 518 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 GMEB2Q9UKD1 530 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 NCOR1O75376 2440 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 C2orf72A6NCS6 295 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 H7C1C5 153 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 HCRTR2O43614 444 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 TMCC2O75069 709 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 WISP1O95388 367 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 PDGFBP01127 241 aaPredicted RBP11.36□□□□□ -0.59
CIITA-212ENST00000618207 IL1AP01583 271 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 SBK2P0C263 348 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 GIMD1P0DJR0 217 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 AQP2P41181 271 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 LCN6P62502 163 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 TOMM34Q15785 309 aaPredicted RBP11.36□□□□□ -0.59
CIITA-212ENST00000618207 ZNF79Q15937 498 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 TMEM44Q2T9K0 475 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 HLA-DQA1Q5Y7H0 255 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms