RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 ARGLU1Q9NWB6 273 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-228ENST00000617771 NOSIPQ9Y314 301 aaKnown RBP22.33■■□□□ 1.17
VEGFA-228ENST00000617771 A0A096LPI6 279 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 ZNF716A6NP11 495 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 HMGB1P1B2RPK0 211 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-228ENST00000617771 CLIC1O00299 241 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 EIF1BO60739 113 aaKnown RBP22.32■■□□□ 1.16
VEGFA-228ENST00000617771 AQP5P55064 265 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 COPZ1P61923 177 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 SLC35A1P78382 337 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 CAPRIN1Q14444 709 aaKnown RBP22.32■■□□□ 1.16
VEGFA-228ENST00000617771 RGNQ15493 299 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 TAB1Q15750 504 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 TMEM204Q9BSN7 226 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 NAA11Q9BSU3 229 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-228ENST00000617771 ADAM19Q9H013 955 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 DLL4Q9NR61 685 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 INTS9Q9NV88 658 aaKnown RBP22.32■■□□□ 1.16
VEGFA-228ENST00000617771 IFT52Q9Y366 437 aa22.32■■□□□ 1.16
VEGFA-228ENST00000617771 LYZL6O75951 148 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 GKN3PP0CG01 181 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 CXCR1P25024 350 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 SLC16A1P53985 500 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 IRX1P78414 480 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-228ENST00000617771 RPS26P11Q5JNZ5 115 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-228ENST00000617771 PRAMEF8Q5VWM4 474 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 PRAMEF7Q5VXH5 474 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 BLOC1S3Q6QNY0 202 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.31■■□□□ 1.16
VEGFA-228ENST00000617771 KRTAP1-3Q8IUG1 177 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 SPDL1Q96EA4 605 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 SPATA9Q9BWV2 254 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 ESRP2Q9H6T0 727 aaKnown RBP22.31■■□□□ 1.16
VEGFA-228ENST00000617771 A4GALTQ9NPC4 353 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 CCDC167Q9P0B6 97 aa22.31■■□□□ 1.16
VEGFA-228ENST00000617771 NR5A2O00482 541 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 PLAUP00749 431 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 COX5AP20674 150 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 EDNRAP25101 427 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 H3F3AP84243 136 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 STK11Q15831 433 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 Q5PR19 223 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 WBP2NLQ6ICG8 309 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 SSX8Q7RTT4 187 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 FUNDC1Q8IVP5 155 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 CCDC103Q8IW40 242 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 UBE2J2Q8N2K1 259 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 APH1AQ96BI3 265 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 VIPAS39Q9H9C1 493 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 BCL2L10Q9HD36 194 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 TMEM45AQ9NWC5 275 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 RNF115Q9Y4L5 304 aa22.3■■□□□ 1.16
VEGFA-228ENST00000617771 C5orf58C9J3I9 102 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 HS3ST1O14792 307 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 IMPDH2P12268 514 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 BMP2P12643 396 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 HOXB9P17482 250 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-228ENST00000617771 NCF2P19878 526 aaPredicted RBP22.29■■□□□ 1.16
VEGFA-228ENST00000617771 IGHV1-2P23083 117 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 ACAA2P42765 397 aaKnown RBP22.29■■□□□ 1.16
VEGFA-228ENST00000617771 NCMAPQ5T1S8 102 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 LRIF1Q5T3J3 769 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 FBXW9Q5XUX1 488 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 CADM2Q8N3J6 435 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 ZNF611Q8N823 705 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 BBS10Q8TAM1 723 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 TMEM171Q8WVE6 324 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 MUCL1Q96DR8 90 aa22.29■■□□□ 1.16
VEGFA-228ENST00000617771 ZC3H12DA2A288 527 aaKnown RBP22.28■■□□□ 1.16
VEGFA-228ENST00000617771 MRPL33O75394 65 aaKnown RBP22.28■■□□□ 1.16
VEGFA-228ENST00000617771 CD3EP07766 207 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 NUDT7P0C024 238 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 GGT1P19440 569 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 PPIBP23284 216 aaKnown RBP22.28■■□□□ 1.16
VEGFA-228ENST00000617771 IDUAP35475 653 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 ATP4BP51164 291 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 ZNF311Q5JNZ3 666 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 TIMM23BQ5SRD1 257 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 P2RY8Q86VZ1 359 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 CLIP4Q8N3C7 705 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 AKAP1Q92667 903 aaKnown RBP eCLIP22.28■■□□□ 1.16
VEGFA-228ENST00000617771 MAL2Q969L2 176 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 PERPQ96FX8 193 aa22.28■■□□□ 1.16
VEGFA-228ENST00000617771 RAI1Q7Z5J4 1906 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-228ENST00000617771 RAMP1O60894 148 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 TMCC2O75069 709 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 GPIP06744 558 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 SQLEQ14534 574 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 PPA1Q15181 289 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 ADAM5Q6NVV9 412 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 PAQR6Q6TCH4 344 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 PRSS57Q6UWY2 283 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 CKAP2Q8WWK9 683 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 MAGEB18Q96M61 343 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 CXorf56Q9H5V9 222 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 PARPBPQ9NWS1 579 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 ASB6Q9NWX5 421 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 SLC25A37Q9NYZ2 338 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 SLC9A8Q9Y2E8 581 aa22.27■■□□□ 1.16
VEGFA-228ENST00000617771 CLOCKO15516 846 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms