RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 AGR3Q8TD06 166 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 ZHX1-C8orf76Q96EF9 292 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 PLA2G12AQ9BZM1 189 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 SEC61A2Q9H9S3 476 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 HDGFL3Q9Y3E1 203 aa20.41■□□□□ 0.86
MMP28-203ENST00000612672 LOC390937A0A1W2PQ73 354 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 TMEM114B3SHH9 223 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 AP3D1O14617 1153 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 DNPH1O43598 174 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 STX11O75558 287 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 C1QCP02747 245 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 BMP4P12644 408 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 DDX5P17844 614 aaKnown RBP20.4■□□□□ 0.86
MMP28-203ENST00000612672 SQLEQ14534 574 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 ZSWIM7Q19AV6 140 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 IQCCQ4KMZ1 466 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 C4orf33Q8N1A6 199 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 ZIC4Q8N9L1 334 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 MOAP1Q96BY2 351 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 SLC35G5Q96KT7 338 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 C16orf45Q96MC5 204 aaPredicted RBP20.4■□□□□ 0.86
MMP28-203ENST00000612672 VRK1Q99986 396 aaPredicted RBP20.4■□□□□ 0.86
MMP28-203ENST00000612672 BHLHE41Q9C0J9 482 aaPredicted RBP20.4■□□□□ 0.86
MMP28-203ENST00000612672 UPB1Q9UBR1 384 aa20.4■□□□□ 0.86
MMP28-203ENST00000612672 TMEM72A0PK05 275 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 ZC3H12DA2A288 527 aaKnown RBP20.39■□□□□ 0.85
MMP28-203ENST00000612672 PRAMEF27A3QJZ7 478 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 CFLARO15519 480 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 CHEK2O96017 543 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 FGF4P08620 206 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 RPL3P39023 403 aaKnown RBP20.39■□□□□ 0.85
MMP28-203ENST00000612672 MAGEA8P43361 318 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 LGALS3BPQ08380 585 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 SLC17A1Q14916 467 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 ADIPOQQ15848 244 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 LSM12Q3MHD2 195 aaKnown RBP20.39■□□□□ 0.85
MMP28-203ENST00000612672 ATP6AP1LQ52LC2 224 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 C6orf136Q5SQH8 315 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 IL23RQ5VWK5 629 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 LIPNQ5VXI9 398 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 FRRS1Q6ZNA5 592 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 GRINAQ7Z429 371 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 ZNF563Q8TA94 476 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 DUSP26Q9BV47 211 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 OR51I1Q9H343 314 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 TMEM181Q9P2C4 612 aa20.39■□□□□ 0.85
MMP28-203ENST00000612672 SPIN1Q9Y657 262 aaPredicted RBP20.39■□□□□ 0.85
MMP28-203ENST00000612672 TCF21O43680 179 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 CDH2P19022 906 aaPredicted RBP20.38■□□□□ 0.85
MMP28-203ENST00000612672 CFPP27918 469 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 MPGP29372 298 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 CCT5P48643 541 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 SNRPD2P62316 118 aaKnown RBP20.38■□□□□ 0.85
MMP28-203ENST00000612672 SLC46A3Q7Z3Q1 461 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 SPATA19Q7Z5L4 167 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 RFLNBQ8N5W9 214 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 PPP3R2Q96LZ3 170 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 ZNF385AQ96PM9 386 aaKnown RBP20.38■□□□□ 0.85
MMP28-203ENST00000612672 MECRQ9BV79 373 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 CA10Q9NS85 328 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 ATAD3AQ9NVI7 634 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 SLC9A8Q9Y2E8 581 aa20.38■□□□□ 0.85
MMP28-203ENST00000612672 TRRAPQ9Y4A5 3859 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 RNF103-CHMP3A0A140T963 221 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 COPEO14579 308 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 LILRA1O75019 489 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 AK1P00568 194 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 IGFBP1P08833 259 aaPredicted RBP20.37■□□□□ 0.85
MMP28-203ENST00000612672 OR12D1P0DN82 309 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 MAPK1P28482 360 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 SERPINF1P36955 418 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 PRPS1P60891 318 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 OR4F3Q6IEY1 312 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 MYPOPQ86VE0 399 aaPredicted RBP20.37■□□□□ 0.85
MMP28-203ENST00000612672 ZCCHC24Q8N2G6 241 aaKnown RBP20.37■□□□□ 0.85
MMP28-203ENST00000612672 CNOT9Q92600 299 aaKnown RBP20.37■□□□□ 0.85
MMP28-203ENST00000612672 RAB8BQ92930 207 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 TRAPPC4Q9Y296 219 aa20.37■□□□□ 0.85
MMP28-203ENST00000612672 TMED7-TICAM2A0A0A6YYA0 188 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 SMIM23A6NLE4 172 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 ANKRD28O15084 1053 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 TRIM13O60858 407 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 LYPLA1O75608 230 aaPredicted RBP20.36■□□□□ 0.85
MMP28-203ENST00000612672 STAMBPO95630 424 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 ALDH3A1P30838 453 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 CALCRP30988 508 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 IDH2P48735 452 aaKnown RBP20.36■□□□□ 0.85
MMP28-203ENST00000612672 TUBA1BP68363 451 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 TUBA4AP68366 448 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 AP1ARQ63HQ0 302 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 ZCCHC23Q6ZST2 131 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 TUBA1AQ71U36 451 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 LINGO2Q7L985 606 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 C16orf62Q7Z3J2 963 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 SLC38A2Q96QD8 506 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 ADAM19Q9H013 955 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 PLK3Q9H4B4 646 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 OSGIN1Q9UJX0 560 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 SLC35A3Q9Y2D2 325 aa20.36■□□□□ 0.85
MMP28-203ENST00000612672 TMED7Q9Y3B3 224 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms