RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 THUMPD3Q9BV44 507 aaKnown RBP8.84□□□□□ -0.99
SSX3-204ENST00000612497 IQCGQ9H095 443 aaKnown RBP8.84□□□□□ -0.99
SSX3-204ENST00000612497 VPS11Q9H270 941 aa8.84□□□□□ -0.99
SSX3-204ENST00000612497 MS4A5Q9H3V2 200 aa8.84□□□□□ -0.99
SSX3-204ENST00000612497 TMEM45AQ9NWC5 275 aa8.84□□□□□ -0.99
SSX3-204ENST00000612497 OXSMQ9NWU1 459 aa8.84□□□□□ -0.99
SSX3-204ENST00000612497 FLVCR1Q9Y5Y0 555 aa8.84□□□□□ -0.99
SSX3-204ENST00000612497 M0R233 179 aa8.83□□□□□ -1
SSX3-204ENST00000612497 ETV2O00321 342 aaPredicted RBP8.83□□□□□ -1
SSX3-204ENST00000612497 NR5A2O00482 541 aa8.83□□□□□ -1
SSX3-204ENST00000612497 TIMM23O14925 209 aa8.83□□□□□ -1
SSX3-204ENST00000612497 SCAMP2O15127 329 aaKnown RBP8.83□□□□□ -1
SSX3-204ENST00000612497 PIN1P1O15428 100 aa8.83□□□□□ -1
SSX3-204ENST00000612497 EIF4E2O60573 245 aaKnown RBP8.83□□□□□ -1
SSX3-204ENST00000612497 PMS2P2O95744 297 aa8.83□□□□□ -1
SSX3-204ENST00000612497 LGI1O95970 557 aa8.83□□□□□ -1
SSX3-204ENST00000612497 FSHBP01225 129 aa8.83□□□□□ -1
SSX3-204ENST00000612497 IGLV1-44P01699 117 aa8.83□□□□□ -1
SSX3-204ENST00000612497 CELA3BP08861 270 aa8.83□□□□□ -1
SSX3-204ENST00000612497 RBP1P09455 135 aa8.83□□□□□ -1
SSX3-204ENST00000612497 NUDT7P0C024 238 aa8.83□□□□□ -1
SSX3-204ENST00000612497 UBL4AP11441 157 aa8.83□□□□□ -1
SSX3-204ENST00000612497 PTMSP20962 102 aa8.83□□□□□ -1
SSX3-204ENST00000612497 POU3F1Q03052 451 aaPredicted RBP8.83□□□□□ -1
SSX3-204ENST00000612497 MVKQ03426 396 aa8.83□□□□□ -1
SSX3-204ENST00000612497 SNTB2Q13425 540 aaKnown RBP8.83□□□□□ -1
SSX3-204ENST00000612497 RASA2Q15283 850 aa8.83□□□□□ -1
SSX3-204ENST00000612497 C3orf36Q3SXR2 165 aa8.83□□□□□ -1
SSX3-204ENST00000612497 REP15Q6BDI9 236 aa8.83□□□□□ -1
SSX3-204ENST00000612497 BRICD5Q6PL45 260 aa8.83□□□□□ -1
SSX3-204ENST00000612497 ABHD12BQ7Z5M8 362 aaPredicted RBP8.83□□□□□ -1
SSX3-204ENST00000612497 TREML1Q86YW5 311 aa8.83□□□□□ -1
SSX3-204ENST00000612497 GSPT2Q8IYD1 628 aaKnown RBP8.83□□□□□ -1
SSX3-204ENST00000612497 POMGNT2Q8NAT1 580 aa8.83□□□□□ -1
SSX3-204ENST00000612497 OR1K1Q8NGR3 316 aa8.83□□□□□ -1
SSX3-204ENST00000612497 METTL6Q8TCB7 284 aa8.83□□□□□ -1
SSX3-204ENST00000612497 WFDC12Q8WWY7 111 aa8.83□□□□□ -1
SSX3-204ENST00000612497 TMEM234Q8WY98 164 aa8.83□□□□□ -1
SSX3-204ENST00000612497 ST8SIA1Q92185 356 aa8.83□□□□□ -1
SSX3-204ENST00000612497 CDS1Q92903 461 aa8.83□□□□□ -1
SSX3-204ENST00000612497 CIDECQ96AQ7 238 aaPredicted RBP8.83□□□□□ -1
SSX3-204ENST00000612497 RAB39BQ96DA2 213 aa8.83□□□□□ -1
SSX3-204ENST00000612497 MRRFQ96E11 262 aaKnown RBP8.83□□□□□ -1
SSX3-204ENST00000612497 GPA33Q99795 319 aa8.83□□□□□ -1
SSX3-204ENST00000612497 ZNF416Q9BWM5 594 aa8.83□□□□□ -1
SSX3-204ENST00000612497 CRNNQ9UBG3 495 aaPredicted RBP8.83□□□□□ -1
SSX3-204ENST00000612497 OPN4Q9UHM6 478 aa8.83□□□□□ -1
SSX3-204ENST00000612497 MID2Q9UJV3 735 aa8.83□□□□□ -1
SSX3-204ENST00000612497 CMAHPQ9Y471 501 aa8.83□□□□□ -1
SSX3-204ENST00000612497 DTNAQ9Y4J8 743 aa8.83□□□□□ -1
SSX3-204ENST00000612497 SPIN1Q9Y657 262 aaPredicted RBP8.83□□□□□ -1
SSX3-204ENST00000612497 A0A096LPE4 126 aa8.82□□□□□ -1
SSX3-204ENST00000612497 A0A1W2PPZ6 126 aa8.82□□□□□ -1
SSX3-204ENST00000612497 PDPK1O15530 556 aa8.82□□□□□ -1
SSX3-204ENST00000612497 DNPH1O43598 174 aa8.82□□□□□ -1
SSX3-204ENST00000612497 GSTA2P09210 222 aa8.82□□□□□ -1
SSX3-204ENST00000612497 GATA3P23771 443 aa8.82□□□□□ -1
SSX3-204ENST00000612497 HSD17B3P37058 310 aa8.82□□□□□ -1
SSX3-204ENST00000612497 HTR6P50406 440 aa8.82□□□□□ -1
SSX3-204ENST00000612497 ATP12AP54707 1039 aa8.82□□□□□ -1
SSX3-204ENST00000612497 CLCQ05315 142 aa8.82□□□□□ -1
SSX3-204ENST00000612497 DAG1Q14118 895 aa8.82□□□□□ -1
SSX3-204ENST00000612497 OTUD3Q5T2D3 398 aaPredicted RBP8.82□□□□□ -1
SSX3-204ENST00000612497 AVPI1Q5T686 147 aa8.82□□□□□ -1
SSX3-204ENST00000612497 KRT80Q6KB66 452 aa8.82□□□□□ -1
SSX3-204ENST00000612497 ANKRD26P1Q6NSI1 321 aa8.82□□□□□ -1
SSX3-204ENST00000612497 ZCCHC12Q6PEW1 402 aa8.82□□□□□ -1
SSX3-204ENST00000612497 SPATC1Q76KD6 591 aa8.82□□□□□ -1
SSX3-204ENST00000612497 AAED1Q7RTV5 226 aa8.82□□□□□ -1
SSX3-204ENST00000612497 MYPOPQ86VE0 399 aaPredicted RBP8.82□□□□□ -1
SSX3-204ENST00000612497 BCL6BQ8N143 479 aaPredicted RBP8.82□□□□□ -1
SSX3-204ENST00000612497 KIR3DL3Q8N743 410 aa8.82□□□□□ -1
SSX3-204ENST00000612497 ZFP28Q8NHY6 868 aa8.82□□□□□ -1
SSX3-204ENST00000612497 BCL2L2Q92843 193 aaPredicted RBP8.82□□□□□ -1
SSX3-204ENST00000612497 AURKBQ96GD4 344 aaPredicted RBP8.82□□□□□ -1
SSX3-204ENST00000612497 BOD1Q96IK1 185 aa8.82□□□□□ -1
SSX3-204ENST00000612497 MOV10Q9HCE1 1003 aaKnown RBP8.82□□□□□ -1
SSX3-204ENST00000612497 SIRT5Q9NXA8 310 aa8.82□□□□□ -1
SSX3-204ENST00000612497 ZNF69Q9UC07 566 aa8.82□□□□□ -1
SSX3-204ENST00000612497 SNX24Q9Y343 169 aa8.82□□□□□ -1
SSX3-204ENST00000612497 HDGFL3Q9Y3E1 203 aa8.82□□□□□ -1
SSX3-204ENST00000612497 POLR3HQ9Y535 204 aaPredicted RBP8.82□□□□□ -1
SSX3-204ENST00000612497 MMP24Q9Y5R2 645 aa8.82□□□□□ -1
SSX3-204ENST00000612497 NUP214P35658 2090 aaPredicted RBP8.82□□□□□ -1
SSX3-204ENST00000612497 ARPC4-TTLL3A0A0A6YYG9 625 aa8.81□□□□□ -1
SSX3-204ENST00000612497 IGHV2OR16-5A0A0B4J2B6 119 aa8.81□□□□□ -1
SSX3-204ENST00000612497 HMX2A2RU54 273 aa8.81□□□□□ -1
SSX3-204ENST00000612497 ZNF587BE7ETH6 402 aa8.81□□□□□ -1
SSX3-204ENST00000612497 GSNP06396 782 aa8.81□□□□□ -1
SSX3-204ENST00000612497 VSIG8P0DPA2 414 aa8.81□□□□□ -1
SSX3-204ENST00000612497 STX2P32856 288 aa8.81□□□□□ -1
SSX3-204ENST00000612497 ALDH3B1P43353 468 aa8.81□□□□□ -1
SSX3-204ENST00000612497 ASMTP46597 345 aa8.81□□□□□ -1
SSX3-204ENST00000612497 SERPINB8P50452 374 aa8.81□□□□□ -1
SSX3-204ENST00000612497 SEC24CP53992 1094 aa8.81□□□□□ -1
SSX3-204ENST00000612497 MRPS11P82912 194 aaKnown RBP8.81□□□□□ -1
SSX3-204ENST00000612497 H3F3AP84243 136 aa8.81□□□□□ -1
SSX3-204ENST00000612497 NPRL3Q12980 569 aa8.81□□□□□ -1
SSX3-204ENST00000612497 SLC9A3R2Q15599 337 aa8.81□□□□□ -1
SSX3-204ENST00000612497 ARMCX4Q5H9R4 360 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms