RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TSPEARQ8WU66 669 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 RNF138Q8WVD3 245 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 CIDECQ96AQ7 238 aaPredicted RBP6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 DTNBP1Q96EV8 351 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SNX18Q96RF0 628 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EBF4Q9BQW3 602 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 SUCNR1Q9BXA5 334 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 C1QTNF5Q9BXJ0 243 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 PRRG4Q9BZD6 226 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 RMND5AQ9H871 391 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 BCAP29Q9UHQ4 241 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 BTNL2Q9UIR0 455 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 DCTN4Q9UJW0 460 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 MGAT4BQ9UQ53 548 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 FKBP7Q9Y680 259 aa6.28□□□□□ -1.4
PTCHD3P1-201ENST00000612350 EPPK1P58107 5090 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 A6NJY4 79 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 SLC22A2O15244 555 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PIN1P1O15428 100 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CFLARO15519 480 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 SCN2BO60939 215 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PGM3O95394 542 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 HK1P19367 917 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PTAFRP25105 342 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CD40P25942 277 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 LCN1P31025 176 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 APOBEC3AP31941 199 aaPredicted RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 LSP1P33241 339 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 EIF1AXP47813 144 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PRIM2P49643 509 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 POLR2JP52435 117 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PSMD4P55036 377 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 IL13RA1P78552 427 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 MRPS22P82650 360 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 MRPS35P82673 323 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 DUSP2Q05923 314 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 SRSF4Q08170 494 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 HSPB3Q12988 150 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 TRIP10Q15642 601 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 LTB4RQ15722 352 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 NNATQ16517 81 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PRSS53Q2L4Q9 553 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CYP27C1Q4G0S4 372 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 SPANXN4Q5MJ08 99 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 TIMM23BQ5SRD1 257 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 RAET1LQ5VY80 246 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 OR4F3Q6IEY1 312 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 ANKRD26P1Q6NSI1 321 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 FAM180BQ6P0A1 224 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 SHQ1Q6PI26 577 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 FAM111BQ6SJ93 734 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 TMEM107Q6UX40 140 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 ZNF551Q7Z340 670 aaPredicted RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 ANKS4BQ8N8V4 417 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CDRT4Q8N9R6 151 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 OR2M3Q8NG83 312 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 RFWD2Q8NHY2 731 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 HOXB13Q92826 284 aaPredicted RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 TMEM186Q96B77 213 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 ADGRG7Q96K78 797 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 VSTM2LQ96N03 204 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CCDC115Q96NT0 180 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 MS4A4EQ96PG1 132 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 OR52E6Q96RD3 313 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 SLC6A7Q99884 636 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 INPP5KQ9BT40 448 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 LMF2Q9BU23 707 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 TMEM120AQ9BXJ8 343 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 SAP130Q9H0E3 1048 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 DSN1Q9H410 356 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 DDX28Q9NUL7 540 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 HIF1ANQ9NWT6 349 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 MRTO4Q9UKD2 239 aaKnown RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 POU2F3Q9UKI9 436 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 GPR55Q9Y2T6 319 aaPredicted RBP6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 AP4B1Q9Y6B7 739 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CMYA5Q8N3K9 4069 aa6.27□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CCDC154A6NI56 674 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 OR6C70A6NIJ9 312 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 DUXAA6NLW8 204 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CCT8L1PA6NM43 557 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CCDC22O60826 627 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 C6orf47O95873 294 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 AGR2O95994 175 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 ZCCHC18P0CG32 403 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 FAM157BP0CG42 384 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CT45A8P0DMV1 189 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CT45A9P0DMV2 189 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 NCF2P19878 526 aaPredicted RBP6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 UQCRC2P22695 453 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 IL12AP29459 219 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 KRT20P35900 424 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 CCT3P49368 545 aaKnown RBP6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 ANXA11P50995 505 aaKnown RBP6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 GNGT1P63211 74 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 HBA1P69905 142 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PHC1P78364 1004 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PSG6Q00889 435 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 PLCXD2Q0VAA5 305 aa6.26□□□□□ -1.41
PTCHD3P1-201ENST00000612350 TP53BP2Q13625 1128 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms