RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ADSLP30566 484 aaPredicted RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 DNAJA1P31689 397 aaKnown RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 NR1H2P55055 460 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 PDK3Q15120 406 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 POU4F3Q15319 338 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 ELOA3BQ3SY89 546 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 C5orf46Q6UWT4 87 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 RANBP3LQ86VV4 465 aaPredicted RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 ARMC8Q8IUR7 673 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 DPP10Q8N608 796 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 ELOA3Q8NG57 546 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 RNF217Q8TC41 542 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 RASSF5Q8WWW0 418 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 APH1AQ96BI3 265 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 PIK3IP1Q96FE7 263 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 ANKRD27Q96NW4 1050 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 CGREF1Q99674 301 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 POTEKPQ9BYX7 375 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 ACTR6Q9GZN1 396 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 ZNF446Q9NWS9 450 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 GID8Q9NWU2 228 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 C6orf203Q9P0P8 240 aaPredicted RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 KLHL14Q9P2G3 628 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 ST6GALNAC2Q9UJ37 374 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 SLC9A8Q9Y2E8 581 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 NBPF19A0A087WUL8 3843 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 TMEM72A0PK05 275 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 FAM221AA4D161 298 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 BCAS1O75363 584 aaPredicted RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 MRPL33O75394 65 aaKnown RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 RAF1P04049 648 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 NUDT7P0C024 238 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 OR3A2P47893 321 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 RGS8P57771 180 aaPredicted RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 GUCY1A3Q02108 690 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 ITGADQ13349 1161 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 CAPRIN1Q14444 709 aaKnown RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 RUNDC3AQ59EK9 446 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 BEX5Q5H9J7 111 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 ANKRD34AQ69YU3 496 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 TMEM225Q6GV28 225 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 PAQR6Q6TCH4 344 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 TFAP2EQ6VUC0 442 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 STAC2Q6ZMT1 411 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 OR52E4Q8NGH9 312 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 DNAJA4Q8WW22 397 aaPredicted RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 MUCL1Q96DR8 90 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 ARL5BQ96KC2 179 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 ECSITQ9BQ95 431 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 CPPED1Q9BRF8 314 aaPredicted RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 TRIM2Q9C040 744 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 OR11A1Q9GZK7 315 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 ADAM19Q9H013 955 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 NSRP1Q9H0G5 558 aaKnown RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 CCDC134Q9H6E4 229 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 TMEM27Q9HBJ8 222 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 SLAMF8Q9P0V8 285 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 UPB1Q9UBR1 384 aa10.97□□□□□ -0.65
CBWD3-208ENST00000612050 TESQ9UGI8 421 aaKnown RBP10.97□□□□□ -0.65
CBWD3-208ENST00000612050 SLC22A2O15244 555 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 CCDC22O60826 627 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 HRGP04196 525 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 PNMTP11086 282 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 HOXB9P17482 250 aaPredicted RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 FPR1P21462 350 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 AQP1P29972 269 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 HOXC12P31275 282 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 MDH1P40925 334 aaKnown RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 ART1P52961 327 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 OR7A5Q15622 319 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 MAPK11Q15759 364 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 TRMT5Q32P41 509 aaKnown RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 COQ5Q5HYK3 327 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 OTUD3Q5T2D3 398 aaPredicted RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 SFRP5Q5T4F7 317 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 ABLIM2Q6H8Q1 611 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 DHRS4L2Q6PKH6 230 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 PAMR1Q6UXH9 720 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 Q6ZT83 130 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 NUFIP2Q7Z417 695 aaKnown RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 ABHD12BQ7Z5M8 362 aaPredicted RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 PATL1Q86TB9 770 aaKnown RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 SERPINA11Q86U17 422 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 CXorf67Q86X51 503 aaPredicted RBP10.96□□□□□ -0.65
CBWD3-208ENST00000612050 WFDC8Q8IUA0 241 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 CLIP4Q8N3C7 705 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 STK35Q8TDR2 534 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 HSD17B8Q92506 261 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 ZNF385DQ9H6B1 395 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 C12orf10Q9HB07 376 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 ADPRHL2Q9NX46 363 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 CAPN7Q9Y6W3 813 aa10.96□□□□□ -0.65
CBWD3-208ENST00000612050 ADGRG4Q8IZF6 3080 aa10.96□□□□□ -0.66
CBWD3-208ENST00000612050 IGKV3D-15A0A087WSY6 115 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 TRBV5-3A0A0A0MS03 114 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 CIB4A0PJX0 185 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 MRASO14807 208 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 OR2T1O43869 369 aa10.95□□□□□ -0.66
CBWD3-208ENST00000612050 MPDZO75970 2070 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms