RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 OR8G3PP0DMU2 310 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 FRKP42685 505 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 DAP3P51398 398 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 GNG2P59768 71 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 FOXK2Q01167 660 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SFTPA2Q8IWL1 248 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF511Q8NB15 262 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 NXF5Q9H1B4 397 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 FN3KQ9H479 309 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 PLEK2Q9NYT0 353 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 MRPS2Q9Y399 296 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 TMED7Q9Y3B3 224 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ASB4Q9Y574 426 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 PCDHGA6Q9Y5G7 932 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 NPFFR2Q9Y5X5 522 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ARID2Q68CP9 1835 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 TDRD6O60522 2096 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 GJE1A6NN92 205 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 A8MV72 311 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 MAKP20794 623 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 HTR3AP46098 478 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 BCAP31P51572 246 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CAV3P56539 151 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SCRN3Q0VDG4 424 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ARHGAP11BQ3KRB8 267 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 C9orf135Q5VTT2 229 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 VN1R4Q7Z5H5 301 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 RPS19BP1Q86WX3 136 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SIRT6Q8N6T7 355 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 Q96M85 177 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 FRMD6Q96NE9 622 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 OR2A5Q96R48 311 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SYT4Q9H2B2 425 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SMOC1Q9H4F8 434 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 FAM60AQ9NP50 221 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 FSCN3Q9NQT6 498 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 NXT1Q9UKK6 140 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 PCDHGB6Q9Y5F9 930 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 PCDHGB2Q9Y5G2 931 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 DOCK6Q96HP0 2047 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ARHGAP33O14559 1287 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CTDSP2O14595 271 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SYT7O43581 403 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 MRPS14O60783 128 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 RBBP9O75884 186 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ICAM2P13598 275 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 POU3F2P20265 443 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 DPP4P27487 766 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 STARP49675 285 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SSR4P51571 173 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CAMK2DQ13557 499 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SMCO1Q147U7 214 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 BCL2L15Q5TBC7 163 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 GPR139Q6DWJ6 353 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF613Q6PF04 617 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 TMPPEQ6ZT21 453 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 DPY19L4Q7Z388 723 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SLC35F3Q8IY50 421 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SLC37A3Q8NCC5 494 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CADM4Q8NFZ8 388 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 OR7G1Q8NGA0 311 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 OR4N2Q8NGD1 307 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 GPBAR1Q8TDU6 330 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ZNF582Q96NG8 517 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CHST8Q9H2A9 424 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CLEC2DQ9UHP7 191 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 GRIP1Q9Y3R0 1128 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 PIKFYVEQ9Y2I7 2098 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 LILRA5A6NI73 299 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 OR6C70A6NIJ9 312 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 AGAP5A6NIR3 686 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 A6NIZ1 184 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 INMT-MINDY4F8WBC2 141 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 WRBO00258 174 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 PHYHO14832 338 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CHP2O43745 196 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SLC19A2O60779 497 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 WDPCPO95876 746 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 LCATP04180 440 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CD63P08962 238 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 UCHL1P09936 223 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 BCKDHBP21953 392 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 FPR3P25089 353 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CSNK1A1P48729 337 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 PPP5CP53041 499 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 AP2S1P53680 142 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SNU13P55769 128 aaKnown RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 RAP1BP61224 184 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 RAP1AP62834 184 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 MELKQ14680 651 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 HYAL4Q2M3T9 481 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ACSM5Q6NUN0 579 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 GUSBP11Q6P575 273 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 CCBE1Q6UXH8 406 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-218ENST00000610726 GDPGP1Q6ZNW5 385 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 RAB11FIP2Q7L804 512 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 SERPINA12Q8IW75 414 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 ESX1Q8N693 406 aa6.72□□□□□ -1.33
CSDE1-218ENST00000610726 BCORP1Q8N888 145 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms