RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ALG6Q9Y672 507 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 DDX49Q9Y6V7 483 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 AGRNO00468 2067 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 ZFP92A6NM28 416 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 PP2D1A8MPX8 630 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 KLLNB2CW77 178 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 RSPH10B2B2RC85 870 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 ZNF879B4DU55 563 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 XPO1O14980 1071 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 GMFGO60234 142 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 LYPLA1O75608 230 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 LYPD3O95274 346 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CA1P00915 261 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 HSPB1P04792 205 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 RSPH10BP0C881 870 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 STAG3L3P0CL85 134 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CPN1P15169 458 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 RPA2P15927 270 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 HNRNPA2B1P22626 353 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 PSMA5P28066 241 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CHI3L1P36222 383 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 HPCAL1P37235 193 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CCT6AP40227 531 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CDKN1BP46527 198 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 HAAOP46952 286 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 LIPEQ05469 1076 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 SELPLGQ14242 412 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 LIPNQ5VXI9 398 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 PDPK2PQ6A1A2 396 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 DNM1P46Q6ZS02 220 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 COMTD1Q86VU5 262 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CCDC65Q8IXS2 484 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 FAM9CQ8IZT9 166 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 MTURNQ8N3F0 131 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CLDN19Q8N6F1 224 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 BHLHE23Q8NDY6 225 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 STXBP6Q8NFX7 210 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 OR51G2Q8NGK0 314 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 MSANTD3Q96H12 275 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CELF6Q96J87 481 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 MS4A14Q96JA4 679 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 B3GALT6Q96L58 329 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 RIT2Q99578 217 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 ZBTB18Q99592 522 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 UQCC2Q9BRT2 126 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 SIKE1Q9BRV8 207 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 CNPY3Q9BT09 278 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 MTG1Q9BT17 334 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 NMUR2Q9GZQ4 415 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 NXF5Q9H1B4 397 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 EXO5Q9H790 373 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 PTGES2Q9H7Z7 377 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 ELOVL3Q9HB03 270 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 TMEM9Q9P0T7 183 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 FRMPD4Q14CM0 1322 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 TNRQ92752 1358 aa3.08□□□□□ -1.92
SMCHD1-213ENST00000609587 A0A1W2PNV4 684 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 HDAC3O15379 428 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 YKT6O15498 198 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 MED7O43513 233 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 NIPSNAP2O75323 286 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 MTX2O75431 263 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 KRTAP5-8O75690 187 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 UGT2B17O75795 530 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 CBR3O75828 277 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 FLOT1O75955 427 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 CRYGCP07315 174 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 H2BFMP0C1H6 154 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 IQCF3P0C7M6 154 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 OR8U8P0C7N1 319 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 IGLL1P15814 213 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 U2AF2P26368 475 aaKnown RBP eCLIP3.07□□□□□ -1.924e-9■■□□□ 13.2
SMCHD1-213ENST00000609587 NMT1P30419 496 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 KIR2DS2P43631 304 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 SLC11A1P49279 550 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 CCNHP51946 323 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 PRMT2P55345 433 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 ACTR3P61158 418 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 LYZP61626 148 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 UBE2IP63279 158 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 NDPQ00604 133 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 CUL1Q13616 776 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 SYPL1Q16563 259 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 KYAT1Q16773 422 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 LRRC36Q1X8D7 754 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 GGTA1PQ4G0N0 100 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 PRAMEF20Q5VT98 475 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 PYHIN1Q6K0P9 492 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 FAM71F2Q6NXP2 309 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 C8orf74Q6P047 294 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 FAM199XQ6PEV8 388 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 SKA3Q8IX90 412 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 PRR22Q8IZ63 422 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 CEND1Q8N111 149 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 C14orf178Q8N769 122 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 OR10H4Q8NGA5 316 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 OR5L2Q8NGL0 311 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 FAM3CQ92520 227 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 CDKL2Q92772 493 aa3.07□□□□□ -1.92
SMCHD1-213ENST00000609587 RPL3LQ92901 407 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms