RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 LAMP1P11279 417 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 DAOP14920 347 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 CCT5P48643 541 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 PPOXP50336 477 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 UBE2NP61088 152 aaKnown RBP15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 SLC25A3Q00325 362 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 ZNF141Q15928 474 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 OR5AK3PQ8NH89 298 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 NEU4Q8WWR8 484 aaPredicted RBP15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 DDIT4LQ96D03 193 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 ARL5BQ96KC2 179 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 SLC38A2Q96QD8 506 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 SOX7Q9BT81 388 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 CCDC106Q9BWC9 280 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 METTL17Q9H7H0 456 aaPredicted RBP15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 GRPEL1Q9HAV7 217 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 TNFRSF12AQ9NP84 129 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 OBP2BQ9NPH6 170 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 TMEM45AQ9NWC5 275 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 MKLN1Q9UL63 735 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 SLC35A3Q9Y2D2 325 aa15.13■□□□□ 0.01
CHMP4A-211ENST00000609024 PDLIM1O00151 329 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 LSM1O15116 133 aaKnown RBP15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 PDE5AO76074 875 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 ABHD2P08910 425 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 CPA3P15088 417 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 MATN1P21941 496 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 NTF4P34130 210 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 HTR3AP46098 478 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 ETF1P62495 437 aaKnown RBP15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 FAM153CQ494X1 144 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 HIKESHIQ53FT3 197 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 TSPO2Q5TGU0 170 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 SHQ1Q6PI26 577 aaKnown RBP15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 POMGNT2Q8NAT1 580 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 PMM1Q92871 262 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 GCDHQ92947 438 aaPredicted RBP15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 KATNB1Q9BVA0 655 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 OR11A1Q9GZK7 315 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 TRAPPC4Q9Y296 219 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 FLVCR1Q9Y5Y0 555 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 ARFGEF3Q5TH69 2177 aa15.12■□□□□ 0.01
CHMP4A-211ENST00000609024 DNAJA2O60884 412 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 LYPLA1O75608 230 aaPredicted RBP15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 UGT2B17O75795 530 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 PROCP04070 461 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 IFNGR1P15260 489 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 CREB1P16220 341 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 GCAP28676 217 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 RPS26P62854 115 aaKnown RBP15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 ATAD3BQ5T9A4 648 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 AAED1Q7RTV5 226 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 PSMA8Q8TAA3 256 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 ZNF418Q8TF45 676 aaPredicted RBP15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 WDR60Q8WVS4 1066 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 PPP3R2Q96LZ3 170 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 MOV10Q9HCE1 1003 aaKnown RBP15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 DYNLRB1Q9NP97 96 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 OXSMQ9NWU1 459 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 EMCNQ9ULC0 261 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 PCDHGB4Q9UN71 923 aa15.11■□□□□ 0.01
CHMP4A-211ENST00000609024 IGHV1-18A0A0C4DH31 117 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 FCMRO60667 390 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 SLU7O95391 586 aaKnown RBP15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 AGR2O95994 175 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 TACSTD2P09758 323 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 GIFP27352 417 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 DVL1P1P54792 670 aaPredicted RBP15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 CDH15P55291 814 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 EFNB3Q15768 340 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 ADIPOQQ15848 244 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 ARHGAP11BQ3KRB8 267 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 FAM174BQ3ZCQ3 159 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 RNF165Q6ZSG1 346 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 TRMT10CQ7L0Y3 403 aaKnown RBP15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 GLCCI1Q86VQ1 547 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 ARFGAP2Q8N6H7 521 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 OR4F15Q8NGB8 312 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 SLC35G5Q96KT7 338 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 PLK3Q9H4B4 646 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 MID2Q9UJV3 735 aa15.1■□□□□ 0.01
CHMP4A-211ENST00000609024 hCG_2039718K7EN88 272 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 VENTXO95231 258 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 IL2RGP31785 369 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 IDH2P48735 452 aaKnown RBP15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 HPCAP84074 193 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 CCNIQ14094 377 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 ATP6AP1LQ52LC2 224 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 KANK2Q63ZY3 851 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 C6orf120Q7Z4R8 191 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 GPAT4Q86UL3 456 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 UBASH3BQ8TF42 649 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 TWIST2Q8WVJ9 160 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 AURKBQ96GD4 344 aaPredicted RBP15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 DUSP26Q9BV47 211 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 SAP130Q9H0E3 1048 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 TUBB1Q9H4B7 451 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 GRIP1Q9Y3R0 1128 aa15.09■□□□□ 0.01
CHMP4A-211ENST00000609024 WDR45Q9Y484 360 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms