RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 ZNF691Q5VV52 312 aa10.48□□□□□ -0.73
CTCFL-221ENST00000608903 C1QL3Q5VWW1 255 aa10.48□□□□□ -0.73
CTCFL-221ENST00000608903 SULF2Q8IWU5 870 aa10.48□□□□□ -0.73
CTCFL-221ENST00000608903 NRMQ8IXM6 262 aa10.48□□□□□ -0.73
CTCFL-221ENST00000608903 GTPBP3Q969Y2 492 aaKnown RBP10.48□□□□□ -0.73
CTCFL-221ENST00000608903 JSRP1Q96MG2 331 aaPredicted RBP10.48□□□□□ -0.73
CTCFL-221ENST00000608903 UBL7Q96S82 380 aaPredicted RBP10.48□□□□□ -0.73
CTCFL-221ENST00000608903 SDHAF3Q9NRP4 125 aa10.48□□□□□ -0.73
CTCFL-221ENST00000608903 TMCC3Q9ULS5 477 aa10.48□□□□□ -0.73
CTCFL-221ENST00000608903 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 ZC3H12DA2A288 527 aaKnown RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 ETV2O00321 342 aaPredicted RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 KPNA4O00629 521 aaPredicted RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 MAGEB3O15480 346 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 KLF4O43474 513 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 OR10H3O60404 316 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 SP1P08047 785 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 HTR1AP08908 422 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 CCNA2P20248 432 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 MAKP20794 623 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 CRHBPP24387 322 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 MSX1P28360 303 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 RFC3P40938 356 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 ENTPD1P49961 510 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 RAD23AP54725 363 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 SUMO3P55854 103 aaPredicted RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 COPZ1P61923 177 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 RPP38P78345 283 aaKnown RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 IL1RL1Q01638 556 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 FOXF1Q12946 379 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 C6orf141Q5SZD1 244 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 C1orf94Q6P1W5 598 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 POMZP3Q6PJE2 187 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 ZNF730Q6ZMV8 503 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 MBOAT2Q6ZWT7 520 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 CLVS1Q8IUQ0 354 aaPredicted RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 OR2M7Q8NG81 312 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 DNAJA4Q8WW22 397 aaPredicted RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 TMEM239Q8WW34 195 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 C12orf43Q96C57 262 aaKnown RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 C1GALT1C1Q96EU7 318 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 DOK1Q99704 481 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 SMAD5Q99717 465 aaKnown RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 YTHDF1Q9BYJ9 559 aaKnown RBP10.47□□□□□ -0.73
CTCFL-221ENST00000608903 RNF32Q9H0A6 362 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 RIBC2Q9H4K1 309 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 ABI3Q9P2A4 366 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 RPS6KB2Q9UBS0 482 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 REV1Q9UBZ9 1251 aa10.47□□□□□ -0.73
CTCFL-221ENST00000608903 MGAQ8IWI9 3026 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 TMEM72A0PK05 275 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 ARRDC5A6NEK1 342 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 TRIM64BA6NI03 449 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 LRRN3E7EW58 273 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 E9PQ18 207 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 CDC42EP2O14613 210 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 BCKDKO14874 412 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 SNX4O95219 450 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 GP1BBP13224 206 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 GPR4P46093 362 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 PIGFQ07326 219 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 RFX4Q33E94 735 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 SLC25A25Q6KCM7 469 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 KLHL17Q6TDP4 642 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 Q6ZPB1 254 aaPredicted RBP10.46□□□□□ -0.73
CTCFL-221ENST00000608903 CCDC71Q8IV32 467 aaPredicted RBP10.46□□□□□ -0.73
CTCFL-221ENST00000608903 ATG16L2Q8NAA4 619 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 OR1J4Q8NGS1 313 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 ZNF420Q8TAQ5 688 aaPredicted RBP10.46□□□□□ -0.73
CTCFL-221ENST00000608903 CNIH3Q8TBE1 160 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 FBLIM1Q8WUP2 373 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 HDAC2Q92769 488 aaKnown RBP10.46□□□□□ -0.73
CTCFL-221ENST00000608903 ABTB1Q969K4 478 aaPredicted RBP10.46□□□□□ -0.73
CTCFL-221ENST00000608903 DNAJA3Q96EY1 480 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 SCMH1Q96GD3 660 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 CRELD1Q96HD1 420 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 FAM46AQ96IP4 442 aaKnown RBP10.46□□□□□ -0.73
CTCFL-221ENST00000608903 ADNPQ9H2P0 1102 aa10.46□□□□□ -0.73
CTCFL-221ENST00000608903 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.74
CTCFL-221ENST00000608903 NME2P1O60361 137 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 NME2P22392 152 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 DCKP27707 260 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 CASRP41180 1078 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 TNFSF10P50591 281 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 ARHGDIAP52565 204 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 ARG2P78540 354 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 PRKCDQ05655 676 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 LTBQ06643 244 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 FHL1Q13642 323 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 TBR1Q16650 682 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 TMEM44Q2T9K0 475 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 SLC25A53Q5H9E4 307 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 UNQ6494/PRO21346Q6UXR6 183 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 KCTD8Q6ZWB6 473 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 GALNTL5Q7Z4T8 443 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 KIF18BQ86Y91 864 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 OR4K17Q8NGC6 315 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 DGCR6LQ9BY27 220 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 UBQLN3Q9H347 655 aa10.46□□□□□ -0.74
CTCFL-221ENST00000608903 PAK1IP1Q9NWT1 392 aaPredicted RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms