RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PCDHAC1Q9H158 963 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 POLR2J3Q9H1A7 115 aaKnown RBP12.79□□□□□ -0.36
CTSA-219ENST00000607841 RNF122Q9H9V4 155 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 GLRX2Q9NS18 164 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 ZNF629Q9UEG4 869 aaPredicted RBP12.79□□□□□ -0.36
CTSA-219ENST00000607841 Q9UFV3 132 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 TRAPPC4Q9Y296 219 aa12.79□□□□□ -0.36
CTSA-219ENST00000607841 A0A0B4J2E0 115 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 A0A1B0GX12 115 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 KDM4EB2RXH2 506 aaPredicted RBP12.78□□□□□ -0.36
CTSA-219ENST00000607841 DVL2O14641 736 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 DNPH1O43598 174 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 TPST2O60704 377 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 CLDN14O95500 239 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 PMS2P2O95744 297 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 TMIGD3P0DMS9 266 aaPredicted RBP12.78□□□□□ -0.36
CTSA-219ENST00000607841 ENPP1P22413 925 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 OPRM1P35372 400 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 DIO1P49895 249 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 MYBPHQ13203 477 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 CEACAM7Q14002 265 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 ZNF239Q16600 458 aaKnown RBP12.78□□□□□ -0.36
CTSA-219ENST00000607841 IFI44LQ53G44 452 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 C5orf46Q6UWT4 87 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 RBM45Q8IUH3 476 aaKnown RBP12.78□□□□□ -0.36
CTSA-219ENST00000607841 CCDC71Q8IV32 467 aaPredicted RBP12.78□□□□□ -0.36
CTSA-219ENST00000607841 MCEMP1Q8IX19 187 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 SLC43A2Q8N370 569 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 OR4D11Q8NGI4 311 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 LILRB4Q8NHJ6 448 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
CTSA-219ENST00000607841 SLC38A4Q969I6 547 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 NSMCE2Q96MF7 247 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 WFDC6Q9BQY6 131 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 OR11A1Q9GZK7 315 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 COQ10BQ9H8M1 238 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 SNX13Q9Y5W8 968 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
CTSA-219ENST00000607841 A0A087WUJ7 227 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 TRAPPC13A5PLN9 417 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 CPSF4LA6NMK7 179 aaKnown RBP12.77□□□□□ -0.37
CTSA-219ENST00000607841 TMEM229AB2RXF0 380 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 EIF1BO60739 113 aaKnown RBP12.77□□□□□ -0.37
CTSA-219ENST00000607841 STAMBPO95630 424 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 IL18BPO95998 194 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 PLGP00747 810 aaPredicted RBP12.77□□□□□ -0.37
CTSA-219ENST00000607841 IFNW1P05000 195 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 IDUAP35475 653 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 OR1E2P47887 323 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 CDH12P55289 794 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 TAS2R41P59536 307 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 SLC35A1P78382 337 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 BNIP1Q12981 228 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 RNPS1Q15287 305 aaKnown RBP12.77□□□□□ -0.37
CTSA-219ENST00000607841 NPTX1Q15818 432 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 ADAMTS16Q8TE57 1224 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 INTS12Q96CB8 462 aaKnown RBP12.77□□□□□ -0.37
CTSA-219ENST00000607841 MPP4Q96JB8 637 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 ARL5BQ96KC2 179 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 BTBD10Q9BSF8 475 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 NAA11Q9BSU3 229 aaPredicted RBP12.77□□□□□ -0.37
CTSA-219ENST00000607841 THTPAQ9BU02 230 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 TAPBPLQ9BX59 468 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 SRXN1Q9BYN0 137 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 MUC13Q9H3R2 512 aa12.77□□□□□ -0.37
CTSA-219ENST00000607841 DCAF13Q9NV06 445 aaKnown RBP12.77□□□□□ -0.37
CTSA-219ENST00000607841 MYO18BQ8IUG5 2567 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 GTF3C1Q12789 2109 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 ARPC2O15144 300 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 CHP2O43745 196 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 OR2T1O43869 369 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 AQP8O94778 261 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 PRKD3O94806 890 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 OR5F1O95221 314 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 AHSA1O95433 338 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 GPIP06744 558 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 RNF224P0DH78 156 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 TNFRSF1BP20333 461 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 BMP5P22003 454 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 MSX2P35548 267 aaPredicted RBP12.76□□□□□ -0.37
CTSA-219ENST00000607841 OR2B6P58173 313 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 CBX1P83916 185 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 SLC25A35Q3KQZ1 300 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 C1orf140Q5VVS0 124 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 PLXDC2Q6UX71 529 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 DEF8Q6ZN54 512 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 FCRLAQ7L513 359 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 VTCN1Q7Z7D3 282 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 NAXEQ8NCW5 288 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 RNF128Q8TEB7 428 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 ROBO4Q8WZ75 1007 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 POP5Q969H6 163 aaKnown RBP12.76□□□□□ -0.37
CTSA-219ENST00000607841 LRRC46Q96FV0 321 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 GMPPAQ96IJ6 420 aaPredicted RBP12.76□□□□□ -0.37
CTSA-219ENST00000607841 HSH2DQ96JZ2 352 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 EPYCQ99645 322 aa12.76□□□□□ -0.37
CTSA-219ENST00000607841 TACO1Q9BSH4 297 aaKnown RBP12.76□□□□□ -0.37
CTSA-219ENST00000607841 GP6Q9HCN6 339 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms