RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	FLVCR1	Q9Y5Y0	555 aa		18.41	■□□□□ 0.54
NECAB3-222	ENST00000607805	CSF3	P09919	207 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	OR12D1	P0DN82	309 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	ZNF16	P17020	682 aa	Predicted RBP	18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	APOBEC3A	P31941	199 aa	Predicted RBP	18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	SWI5	Q1ZZU3	235 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	SMU1	Q2TAY7	513 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	MST1L	Q2TV78	715 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	PGS1	Q32NB8	556 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	C1QTNF12	Q5T7M4	302 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	C16orf62	Q7Z3J2	963 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	LSR	Q86X29	649 aa	Predicted RBP	18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	C17orf78	Q8N4C9	275 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	C1orf162	Q8NEQ5	155 aa	Predicted RBP	18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	KIF18A	Q8NI77	898 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	TUBGCP3	Q96CW5	907 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	DNAJA3	Q96EY1	480 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	BOD1	Q96IK1	185 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	C1QTNF6	Q9BXI9	259 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	SLC7A10	Q9NS82	523 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	TMEM181	Q9P2C4	612 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	WDR45	Q9Y484	360 aa		18.4	■□□□□ 0.54
NECAB3-222	ENST00000607805	LY6H	O94772	140 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	AGR2	O95994	175 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	USF1	P22415	310 aa	Predicted RBP	18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	MAGEA8	P43361	318 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	MAD2L1	Q13257	205 aa	Predicted RBP	18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	SLC17A1	Q14916	467 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	ARIH2OS	Q8N7S6	290 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	ZNF563	Q8TA94	476 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	ROPN1L	Q96C74	230 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	AMDHD2	Q9Y303	409 aa		18.39	■□□□□ 0.53
NECAB3-222	ENST00000607805	CLDN24	A6NM45	220 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	LMX1B	O60663	402 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	IMPDH2	P12268	514 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	IGFBP5	P24593	272 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	RYK	P34925	604 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	KCNJ10	P78508	379 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	LSM11	P83369	360 aa	Known RBP eCLIP	18.38	■□□□□ 0.53	5e-7	■■■■□ 21.6
NECAB3-222	ENST00000607805	CHRNB3	Q05901	458 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	TSPO2	Q5TGU0	170 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	SAXO2	Q658L1	398 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	TCP10L	Q8TDR4	215 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	XAGE5	Q8WWM1	108 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	RAB8B	Q92930	207 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	ZIM3	Q96PE6	472 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	FKRP	Q9H9S5	495 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	NOP53	Q9NZM5	478 aa	Known RBP	18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	ATP23	Q9Y6H3	246 aa		18.38	■□□□□ 0.53
NECAB3-222	ENST00000607805	ZNF208	O43345	1280 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	UQCRC2	P22695	453 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	OR2B6	P58173	313 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	CASP12	Q6UXS9	341 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	RIBC1	Q8N443	379 aa	Predicted RBP	18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	ZIC4	Q8N9L1	334 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	OR4A15	Q8NGL6	344 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	CNOT9	Q92600	299 aa	Known RBP	18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	NEURL3	Q96EH8	262 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	SHARPIN	Q9H0F6	387 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	PARPBP	Q9NWS1	579 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	LGALS13	Q9UHV8	139 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	OSGIN1	Q9UJX0	560 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	PCDHGB4	Q9UN71	923 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	SLC9A8	Q9Y2E8	581 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	PMF1-BGLAP	U3KQ54	211 aa		18.37	■□□□□ 0.53
NECAB3-222	ENST00000607805	TMED7-TICAM2	A0A0A6YYA0	188 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	PRSS51	A0A1B0GVH4	220 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	TMEM72	A0PK05	275 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	SLC35F4	A4IF30	521 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	ATP6V1G2-DDX39B	F2Z307	99 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	AP3D1	O14617	1153 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	EIF1B	O60739	113 aa	Known RBP	18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	SPAG7	O75391	227 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	C1QC	P02747	245 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	BPGM	P07738	259 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	BMP4	P12644	408 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	HTR3A	P46098	478 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	IDH2	P48735	452 aa	Known RBP	18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	SLC35A1	P78382	337 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	ATAD3B	Q5T9A4	648 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	C9orf135	Q5VTT2	229 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	HMGN2P46	Q86SG4	172 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	ARFGAP2	Q8N6H7	521 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	TMEM45B	Q96B21	275 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	PRR14	Q9BWN1	585 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	TMED7	Q9Y3B3	224 aa		18.36	■□□□□ 0.53
NECAB3-222	ENST00000607805	TLDC2	A0PJX2	215 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	ZC3H12D	A2A288	527 aa	Known RBP	18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	HMGN4	O00479	90 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	FAAH	O00519	579 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	NUDT17	P0C025	328 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	CREB1	P16220	341 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	MPG	P29372	298 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	ETV4	P43268	484 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	GZMK	P49863	264 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	CASP8	Q14790	479 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	PAQR6	Q6TCH4	344 aa		18.35	■□□□□ 0.53
NECAB3-222	ENST00000607805	ANKRD46	Q86W74	232 aa		18.35	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms