RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TMEM181Q9P2C4 612 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 LPAR3Q9UBY5 353 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 MARCOQ9UEW3 520 aaPredicted RBP13.06□□□□□ -0.32
CTSA-216ENST00000607212 SLC9A8Q9Y2E8 581 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 AMDHD2Q9Y303 409 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 TMED7Q9Y3B3 224 aa13.06□□□□□ -0.32
CTSA-216ENST00000607212 ATRQ13535 2644 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 BCAS1O75363 584 aaPredicted RBP13.05□□□□□ -0.32
CTSA-216ENST00000607212 BPGMP07738 259 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 THBS1P07996 1170 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 ITGA5P08648 1049 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 CSF3P09919 207 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 UQCRBP14927 111 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 FKBP2P26885 142 aaKnown RBP13.05□□□□□ -0.32
CTSA-216ENST00000607212 POLR2HP52434 150 aaKnown RBP13.05□□□□□ -0.32
CTSA-216ENST00000607212 FOXG1P55316 489 aaPredicted RBP13.05□□□□□ -0.32
CTSA-216ENST00000607212 KCNJ10P78508 379 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 VLDLRP98155 873 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 LOXL1Q08397 574 aaPredicted RBP13.05□□□□□ -0.32
CTSA-216ENST00000607212 C3orf49Q96BT1 292 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 PKNOX2Q96KN3 472 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 SLC35A5Q9BS91 424 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 MALT1Q9UDY8 824 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 FKBP7Q9Y680 259 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 YLPM1P49750 1951 aaKnown RBP13.05□□□□□ -0.32
CTSA-216ENST00000607212 PLCE1Q9P212 2302 aa13.05□□□□□ -0.32
CTSA-216ENST00000607212 GOLGA8QA0A0J9YX86 632 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 TMEM72A0PK05 275 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 GOLGA8OA6NCC3 632 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 CLDN24A6NM45 220 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 ATP6V1G2-DDX39BF2Z307 99 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 GOLGA8NF8WBI6 632 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 H7C417 338 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 DNPH1O43598 174 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 EIF1BO60739 113 aaKnown RBP13.04□□□□□ -0.32
CTSA-216ENST00000607212 DNAJA2O60884 412 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 SCN2BO60939 215 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 LY6HO94772 140 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 WNT11O96014 354 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 NUDT17P0C025 328 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 USF1P22415 310 aaPredicted RBP13.04□□□□□ -0.32
CTSA-216ENST00000607212 APOBEC3AP31941 199 aaPredicted RBP13.04□□□□□ -0.32
CTSA-216ENST00000607212 ARRB2P32121 409 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 CLK1P49759 484 aaKnown RBP13.04□□□□□ -0.32
CTSA-216ENST00000607212 PDLIM4P50479 330 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 EFNA4P52798 201 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 NME5P56597 212 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 PRPS1P60891 318 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 PHC1P78364 1004 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 GNA13Q14344 377 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 EMBQ6PCB8 327 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 FRRS1Q6ZNA5 592 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 ADGRG3Q86Y34 549 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 PMM1Q92871 262 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 MUS81Q96NY9 551 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 AKTIPQ9H8T0 292 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 SLC17A5Q9NRA2 495 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 DCTN4Q9UJW0 460 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 KCNS2Q9ULS6 477 aa13.04□□□□□ -0.32
CTSA-216ENST00000607212 PRSS51A0A1B0GVH4 220 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 ELOA3DA6NLF2 546 aaPredicted RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 HAX1O00165 279 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 AP3D1O14617 1153 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 KLF11O14901 512 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 LMX1BO60663 402 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 MYZAPP0CAP1 466 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 TACR3P29371 465 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 S100A3P33764 101 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 ANXA11P50995 505 aaKnown RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 SLC16A1P53985 500 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 SNRPD2P62316 118 aaKnown RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
CTSA-216ENST00000607212 CHI3L2Q15782 390 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 ELOA3BQ3SY89 546 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 IQCCQ4KMZ1 466 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 OTUD3Q5T2D3 398 aaPredicted RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 TSPO2Q5TGU0 170 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 SAXO2Q658L1 398 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 AAED1Q7RTV5 226 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 SLC46A3Q7Z3Q1 461 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 GPAT4Q86UL3 456 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 LSRQ86X29 649 aaPredicted RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 C17orf78Q8N4C9 275 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 WDR31Q8NA23 367 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 FAM71CQ8NEG0 241 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 ELOA3Q8NG57 546 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 OR8J2Q8NGG1 315 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 MIPOL1Q8TD10 442 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 C10orf105Q8TEF2 133 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 WDR60Q8WVS4 1066 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 OIT3Q8WWZ8 545 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 CNOT9Q92600 299 aaKnown RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 PROX1Q92786 737 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 ZG16BQ96DA0 208 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 VRK1Q99986 396 aaPredicted RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 EXOSC3Q9NQT5 275 aaKnown RBP13.03□□□□□ -0.32
CTSA-216ENST00000607212 SLC7A10Q9NS82 523 aa13.03□□□□□ -0.32
CTSA-216ENST00000607212 ASIC5Q9NY37 505 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms