RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 TGFBR3Q03167 851 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 TAF7Q15545 349 aaPredicted RBP2.55□□□□□ -2
RNU6-88P-201ENST00000606801 CCDC152Q4G0S7 254 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 C1orf220Q5T0J3 134 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 CASC10Q5T4H9 136 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 ARCQ7LC44 396 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 VSTM4Q8IW00 320 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 DCAF4L2Q8NA75 395 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 SUMF2Q8NBJ7 301 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 NEIL3Q8TAT5 605 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 RLN3Q8WXF3 142 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 ST8SIA1Q92185 356 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 MRPS31Q92665 395 aaKnown RBP2.55□□□□□ -2
RNU6-88P-201ENST00000606801 MYDGFQ969H8 173 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 SLC35E1Q96K37 410 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 TUBGCP2Q9BSJ2 902 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 POLR1EQ9GZS1 481 aaKnown RBP2.55□□□□□ -2
RNU6-88P-201ENST00000606801 LRRN3Q9H3W5 708 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 UFSP2Q9NUQ7 469 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 AATFQ9NY61 560 aaKnown RBP eCLIP2.55□□□□□ -2
RNU6-88P-201ENST00000606801 RPH3ALQ9UNE2 315 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 PRG3Q9Y2Y8 225 aaPredicted RBP2.55□□□□□ -2
RNU6-88P-201ENST00000606801 TIMM10BQ9Y5J6 103 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 CDH10Q9Y6N8 788 aa2.55□□□□□ -2
RNU6-88P-201ENST00000606801 PTCH1Q13635 1447 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 KIF16BQ96L93 1317 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 A8MUA0 341 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 ABCD4O14678 606 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 TPST2O60704 377 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 PFKFB2O60825 505 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 IMPDH1P20839 514 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 MDKP21741 143 aaPredicted RBP2.54□□□□□ -2
RNU6-88P-201ENST00000606801 HTR1EP28566 365 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 MAP3K8P41279 467 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 ARFIP1P53367 373 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 UBE2HP62256 183 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 BCL7AQ4VC05 210 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 CARD16Q5EG05 197 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 BEND3Q5T5X7 828 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 C1orf146Q5VVC0 180 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 C11orf71Q6IPW1 123 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 STEAP2Q8NFT2 490 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 TRMT10AQ8TBZ6 339 aaKnown RBP2.54□□□□□ -2
RNU6-88P-201ENST00000606801 BRSK1Q8TDC3 778 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 SECISBP2Q96T21 854 aaKnown RBP2.54□□□□□ -2
RNU6-88P-201ENST00000606801 C20orf85Q9H1P6 137 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 ASB8Q9H765 288 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 SUDS3Q9H7L9 328 aaPredicted RBP2.54□□□□□ -2
RNU6-88P-201ENST00000606801 GORASP2Q9H8Y8 452 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 AIG1Q9NVV5 245 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 SMPD3Q9NY59 655 aaPredicted RBP2.54□□□□□ -2
RNU6-88P-201ENST00000606801 PTBP2Q9UKA9 531 aaKnown RBP2.54□□□□□ -2
RNU6-88P-201ENST00000606801 STAP1Q9ULZ2 295 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 SNX6Q9UNH7 406 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 MYO10Q9HD67 2058 aa2.54□□□□□ -2
RNU6-88P-201ENST00000606801 PLEKHH1Q9ULM0 1364 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 SH3TC1Q8TE82 1336 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 IGHV3OR16-13A0A075B7E8 117 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 IGHV1OR21-1A0A087WYE8 117 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 A6NIZ1 184 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 TMEM110-MUSTN1A8MSY1 372 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 IDSB3KWA1 339 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 MAGEB3O15480 346 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 PRKAB2O43741 272 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 PTMAP06454 111 aaKnown RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 CAPN1P07384 714 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 MGMTP16455 207 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 GCAP28676 217 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 YWHABP31946 246 aaKnown RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 DDOSTP39656 456 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 IFNAR2P48551 515 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 ZNF133P52736 654 aaPredicted RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 RAP1BP61224 184 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 KLRB1Q12918 225 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 VGLL4Q14135 290 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 GANABQ14697 944 aaKnown RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 ARL6IP1Q15041 203 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 TPD52L1Q16890 204 aaPredicted RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 TMEM225Q6GV28 225 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 SYT10Q6XYQ8 523 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 RNF165Q6ZSG1 346 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 CCDC80Q76M96 950 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 TMEM110Q86TL2 294 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 RDH10Q8IZV5 341 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 LINC01555Q8NAE3 123 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 OR4K14Q8NGD5 310 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 OR52M1Q8NGK5 317 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 FGF11Q92914 225 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 COQ2Q96H96 371 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 OXGR1Q96P68 337 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 TSG101Q99816 390 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 SELENOIQ9C0D9 397 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 POLR2J2Q9GZM3 115 aaKnown RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 POLR2J3Q9H1A7 115 aaKnown RBP2.53□□□□□ -2
RNU6-88P-201ENST00000606801 NARFLQ9H6Q4 476 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 FOLH1BQ9HBA9 442 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 APMAPQ9HDC9 416 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 MMP26Q9NRE1 261 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 TREM2Q9NZC2 230 aa2.53□□□□□ -2
RNU6-88P-201ENST00000606801 BTNL2Q9UIR0 455 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms