RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SUCLG1P53597 346 aaKnown RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 IST1P53990 364 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 CLDN15P56746 228 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 CLDN18P56856 261 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 RAC1P63000 192 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 SRYQ05066 204 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 EGR4Q05215 589 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 MYBPHQ13203 477 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 DGCR6Q14129 220 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 LAPTM4AQ15012 233 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 SEC23BQ15437 767 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 EXOC3L2Q2M3D2 409 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 CTU2Q2VPK5 515 aaKnown RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 TMEM176BQ3YBM2 270 aaPredicted RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 KRTCAP3Q53RY4 240 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 C1orf140Q5VVS0 124 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 HMBOX1Q6NT76 420 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 PODNL1Q6PEZ8 512 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 TBPL2Q6SJ96 375 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 PLXDC2Q6UX71 529 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 GFRALQ6UXV0 394 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 PRICKLE2Q7Z3G6 844 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 TMEM179BQ7Z7N9 219 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 AMIGO2Q86SJ2 522 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 MEX3DQ86XN8 651 aaKnown RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 ZNF843Q8N446 348 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 OR5M9Q8NGP3 310 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 PFN4Q8NHR9 129 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 SLC25A43Q8WUT9 341 aaPredicted RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 TMEM239Q8WW34 195 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 DDIT4LQ96D03 193 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 WDYHV1Q96HA8 205 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 MPP4Q96JB8 637 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 ADGRG7Q96K78 797 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 KLHL15Q96M94 604 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 OR5B2Q96R09 309 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 FUZQ9BT04 418 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 TMEM43Q9BTV4 400 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 YY1AP1Q9H869 796 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 COQ10BQ9H8M1 238 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 C12orf10Q9HB07 376 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 S100A14Q9HCY8 104 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 MEPEQ9NQ76 525 aaPredicted RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 SERINC1Q9NRX5 453 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 PNPLA3Q9NST1 481 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 PRDM4Q9UKN5 801 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 LYVE1Q9Y5Y7 322 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 SPIN1Q9Y657 262 aaPredicted RBP6.91□□□□□ -1.3
MSH6-211ENST00000606499 AP4B1Q9Y6B7 739 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 MPDZO75970 2070 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 ZNF407Q9C0G0 2248 aa6.91□□□□□ -1.3
MSH6-211ENST00000606499 TRAV36DV7A0A075B6V5 113 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 OR14I1A6ND48 311 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 ENO4A6NNW6 628 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 KDM4EB2RXH2 506 aaPredicted RBP6.9□□□□□ -1.3
MSH6-211ENST00000606499 H0Y3Z8 333 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 H0YHG0 523 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 LINC01387J3KSC0 135 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 TNFRSF11BO00300 401 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 GNGT2O14610 69 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 ADAMDEC1O15204 470 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 CLOCKO15516 846 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 ZNF208O43345 1280 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 HNRNPRO43390 633 aaKnown RBP6.9□□□□□ -1.3
MSH6-211ENST00000606499 CXCL13O43927 109 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 NPIPB7O75200 414 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 DEAF1O75398 565 aaPredicted RBP6.9□□□□□ -1.3
MSH6-211ENST00000606499 LDLRP01130 860 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 TPOP07202 933 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 IMPDH2P12268 514 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 CPN1P15169 458 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 ABOP16442 354 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 HOXB6P17509 224 aaKnown RBP6.9□□□□□ -1.3
MSH6-211ENST00000606499 FUT1P19526 365 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 KLK2P20151 261 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 CBLP22681 906 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 FASP25445 335 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 PTGS2P35354 604 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 IDUAP35475 653 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 RBM34P42696 430 aaKnown RBP6.9□□□□□ -1.3
MSH6-211ENST00000606499 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
MSH6-211ENST00000606499 TLE1Q04724 770 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 RCN1Q15293 331 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 ATP6AP1Q15904 470 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 BCL2A1Q16548 175 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 EMC4Q5J8M3 183 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 HBMQ6B0K9 141 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 ZFP1Q6P2D0 407 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 TTC33Q6PID6 262 aaPredicted RBP6.9□□□□□ -1.3
MSH6-211ENST00000606499 ZNF730Q6ZMV8 503 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 ESPNLQ6ZVH7 1005 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 CD163Q86VB7 1156 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 NRMQ8IXM6 262 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 HS3ST5Q8IZT8 346 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 MEIOBQ8N635 442 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 OR4K5Q8NGD3 323 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 OR9Q2Q8NGE9 314 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 OR4C15Q8NGM1 316 aa6.9□□□□□ -1.3
MSH6-211ENST00000606499 OR10D3Q8NH80 312 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms