RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 SLC25A53Q5H9E4 307 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 TIGD3Q6B0B8 471 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 TUBA3EQ6PEY2 450 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 LINC00696Q6ZRV3 163 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 SLC43A2Q8N370 569 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 OR8D4Q8NGM9 314 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 STK35Q8TDR2 534 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 NANSQ9NR45 359 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 GPR83Q9NYM4 423 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 TVP23BQ9NYZ1 205 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 HRH3Q9Y5N1 445 aa16.32■□□□□ 0.2
VRK3-225ENST00000601912 TRAV36DV7A0A075B6V5 113 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 TRAV27A0A087WT01 109 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 TMEM72A0PK05 275 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 A6NL46 340 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 G3V3Y1 287 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 SMNDC1O75940 238 aaKnown RBP eCLIP16.31■□□□□ 0.2
VRK3-225ENST00000601912 WT1P19544 449 aaPredicted RBP16.31■□□□□ 0.2
VRK3-225ENST00000601912 SPINK2P20155 84 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 TEKQ02763 1124 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 FOXF1Q12946 379 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 ZNF74Q16587 644 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 ACSM5Q6NUN0 579 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 ZNF248Q8NDW4 579 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 OR8J1Q8NGP2 316 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 LIPHQ8WWY8 451 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 ZBTB8AQ96BR9 441 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 TNFRSF13CQ96RJ3 184 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 SERINC1Q9NRX5 453 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 SCN3BQ9NY72 215 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 ZNF226Q9NYT6 803 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 CHRNA9Q9UGM1 479 aa16.31■□□□□ 0.2
VRK3-225ENST00000601912 CBR3O75828 277 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 WDPCPO95876 746 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 F10P00742 488 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 HMGN1P05114 100 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 CCDC159P0C7I6 412 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 CNR1P21554 472 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 ADH6P28332 368 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 DSCR4P56555 118 aaPredicted RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 SNAPC1Q16533 368 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 SPINK14Q6IE38 97 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 SLC46A3Q7Z3Q1 461 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 ZNF227Q86WZ6 799 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 LSRQ86X29 649 aaPredicted RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 BPIFB6Q8NFQ5 453 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 TSPAN14Q8NG11 270 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 ZNF566Q969W8 418 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 KTI12Q96EK9 354 aaPredicted RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 GNRHR2Q96P88 292 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 IL20RAQ9UHF4 553 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 SLC1A7O00341 560 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 KLK10O43240 276 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 ZNF208O43345 1280 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 TRIM3O75382 744 aaPredicted RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 HIST1H2ABP04908 130 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 CRHBPP24387 322 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 EEF1B2P24534 225 aaKnown RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 DPP4P27487 766 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 FMO3P31513 532 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 SLC6A6P31641 620 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 RPS5P46782 204 aaKnown RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 DNASE1L1P49184 302 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 PCYT1AP49585 367 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 SNRPGP62308 76 aaKnown RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 BLMHQ13867 455 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 OR1C1Q15619 314 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.3■□□□□ 0.2
VRK3-225ENST00000601912 PGGHGQ32M88 737 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 ANKDD1AQ495B1 522 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 C1orf140Q5VVS0 124 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 LAIR2Q6ISS4 152 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 HIST3H2AQ7L7L0 130 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 LRRC17Q8N6Y2 441 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 APH1BQ8WW43 257 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 HIST1H2ACQ93077 130 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 TAAR8Q969N4 342 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 DDIT4LQ96D03 193 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 DTNBP1Q96EV8 351 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 PLEKHA8Q96JA3 519 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 Q96MT0 163 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 IFT27Q9BW83 186 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 POLDIP3Q9BY77 421 aaKnown RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 UBQLN3Q9H347 655 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 FKRPQ9H9S5 495 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 CLN6Q9NWW5 311 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 AASSQ9UDR5 926 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 BAIAP2Q9UQB8 552 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 TPRKBQ9Y3C4 175 aa16.3■□□□□ 0.2
VRK3-225ENST00000601912 SPIN1Q9Y657 262 aaPredicted RBP16.3■□□□□ 0.2
VRK3-225ENST00000601912 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 MED13Q9UHV7 2174 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 LRRN3E7EW58 273 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 OR2T1O43869 369 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 NPIPB7O75200 414 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 WBP4O75554 376 aaKnown RBP16.29■□□□□ 0.2
VRK3-225ENST00000601912 NEURL1O76050 574 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 NDUFB2O95178 105 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 AHSA1O95433 338 aa16.29■□□□□ 0.2
VRK3-225ENST00000601912 MT-ATP6P00846 226 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms