RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 RGS8P57771 180 aaPredicted RBP15.03■□□□□ -0
TRIM28-215ENST00000601150 OR2B6P58173 313 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 DMTNQ08495 405 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 TMEM201Q5SNT2 666 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 COMTD1Q86VU5 262 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 ZNF610Q8N9Z0 462 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 EFCAB1Q9HAE3 211 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 PLSCR4Q9NRQ2 329 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 ELOVL5Q9NYP7 299 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 TMEM181Q9P2C4 612 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 KLHL9Q9P2J3 617 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 RPS6KB2Q9UBS0 482 aa15.03■□□□□ -0
TRIM28-215ENST00000601150 ZC3H12DA2A288 527 aaKnown RBP15.02■□□□□ -0
TRIM28-215ENST00000601150 TUBAL3A6NHL2 446 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 CYTIPO60759 359 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 YES1P07947 543 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 KLK2P20151 261 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 CD79BP40259 229 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 PCYT1AP49585 367 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 RASGEF1BQ0VAM2 473 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 ERICH5Q6P6B1 374 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 ZNF474Q6S9Z5 364 aaPredicted RBP15.02■□□□□ -0
TRIM28-215ENST00000601150 CCDC80Q76M96 950 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 ARPINQ7Z6K5 226 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 LSMEM1Q8N8F7 131 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 SMYD1Q8NB12 490 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 OR52E4Q8NGH9 312 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 SLC26A7Q8TE54 656 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 FAM222BQ8WU58 562 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 C3orf49Q96BT1 292 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 CMTM5Q96DZ9 223 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 DNAJA3Q96EY1 480 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 ZNF583Q96ND8 569 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 POTEKPQ9BYX7 375 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 TRIM2Q9C040 744 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 BCO1Q9HAY6 547 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 TESQ9UGI8 421 aaKnown RBP15.02■□□□□ -0
TRIM28-215ENST00000601150 AP3M1Q9Y2T2 418 aa15.02■□□□□ -0
TRIM28-215ENST00000601150 ANKHD1Q8IWZ3 2542 aaKnown RBP15.02□□□□□ -0.01
TRIM28-215ENST00000601150 NBPF19A0A087WUL8 3843 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 A8MVM7 634 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 OPN1SWP03999 348 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 C8BP07358 591 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 IMPDH2P12268 514 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 IDUAP35475 653 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 KCNJ5P48544 419 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 NCALDP61601 193 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 SLC35A1P78382 337 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 TLE4Q04727 773 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 VEZF1Q14119 521 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 PIGWQ7Z7B1 504 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 ATG4DQ86TL0 474 aaPredicted RBP15.01□□□□□ -0.01
TRIM28-215ENST00000601150 STK32CQ86UX6 486 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 TUSC5Q8IXB3 177 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 PSD2Q9BQI7 771 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 GPATCH1Q9BRR8 931 aaKnown RBP15.01□□□□□ -0.01
TRIM28-215ENST00000601150 C12orf49Q9H741 205 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 C12orf10Q9HB07 376 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 CRIM1Q9NZV1 1036 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 ARL2BPQ9Y2Y0 163 aa15.01□□□□□ -0.01
TRIM28-215ENST00000601150 NAV2Q8IVL1 2488 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 A0A1B0GWA3 101 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 ELOA3DA6NLF2 546 aaPredicted RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 FAM220BPB1ANY3 271 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 TMEM229AB2RXF0 380 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 EIF1BO60739 113 aaKnown RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 LGI1O95970 557 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 POU2F1P14859 743 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 HTR2AP28223 471 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 PRDX6P30041 224 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 FAM27E3Q08E93 113 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 BNIP2Q12982 314 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 PDK3Q15120 406 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 DUSP7Q16829 419 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 EXOC3L2Q2M3D2 409 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 ELOA3BQ3SY89 546 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 ABLIM2Q6H8Q1 611 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 C6orf89Q6UWU4 347 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 HACD2Q6Y1H2 254 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 NUFIP2Q7Z417 695 aaKnown RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 RANBP3LQ86VV4 465 aaPredicted RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 ELOA3Q8NG57 546 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 GPR32P1Q8NGA4 272 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 PIGXQ8TBF5 258 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 STK35Q8TDR2 534 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 DNAJA4Q8WW22 397 aaPredicted RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 RASSF5Q8WWW0 418 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 TAMM41Q96BW9 452 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 ARHGDIGQ99819 225 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 HOPXQ9BPY8 73 aaPredicted RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 NAA11Q9BSU3 229 aaPredicted RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 PRR14Q9BWN1 585 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 MCCC2Q9HCC0 563 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 FANCFQ9NPI8 374 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 ING1Q9UK53 422 aaPredicted RBP15□□□□□ -0.01
TRIM28-215ENST00000601150 USP22Q9UPT9 525 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 APCP25054 2843 aa15□□□□□ -0.01
TRIM28-215ENST00000601150 DCHS2Q6V1P9 2916 aa14.99□□□□□ -0.01
TRIM28-215ENST00000601150 MAST4O15021 2626 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms