RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 ZC3H12DA2A288 527 aaKnown RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 A6NNC1 897 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 EVPLLA8MZ36 301 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 ANGPT2O15123 496 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 FMO6PO60774 539 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 LYPD3O95274 346 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 SYNGR4O95473 234 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 CNOT4O95628 575 aaKnown RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 LGI1O95970 557 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 C8BP07358 591 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 YES1P07947 543 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 PSMB1P20618 241 aaKnown RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 CD247P20963 164 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 DRD4P21917 467 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 SLC6A2P23975 617 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 EDNRAP25101 427 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 HTR2AP28223 471 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 TACR3P29371 465 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 PCGF2P35227 344 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 UGT2B10P36537 528 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 OR3A2P47893 321 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 CCR4P51679 360 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 MTPNP58546 118 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 CSNK2A1P68400 391 aaPredicted RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 SCARB2Q14108 478 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 TESK1Q15569 626 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 NRF1Q16656 503 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 DUSP7Q16829 419 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF311Q5JNZ3 666 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 GTF2IRD2BQ6EKJ0 949 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 NHLRC1Q6VVB1 395 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 LINC00114Q6XXX2 140 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF550Q7Z398 422 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 NUFIP2Q7Z417 695 aaKnown RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 LUZP2Q86TE4 346 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 GTF2IRD2Q86UP8 949 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 TMEM200AQ86VY9 491 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 LSRQ86X29 649 aaPredicted RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 TREML1Q86YW5 311 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 C11orf65Q8NCR3 313 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 BHLHE22Q8NFJ8 381 aaPredicted RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 GPR32P1Q8NGA4 272 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 LINC01560Q8TB33 94 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 ROBO4Q8WZ75 1007 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 ARHGDIGQ99819 225 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 SLC39A3Q9BRY0 314 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 TACO1Q9BSH4 297 aaKnown RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 PTDSS2Q9BVG9 487 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 OPN3Q9H1Y3 402 aaPredicted RBP7.81□□□□□ -1.16
SSBP4-208ENST00000600628 PIF1Q9H611 641 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 EVA1AQ9H8M9 152 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 SERINC1Q9NRX5 453 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 TMEM181Q9P2C4 612 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 KLHL9Q9P2J3 617 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF232Q9UNY5 417 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 IGKV1D-42A0A075B6H8 117 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 TMEM247A6NEH6 219 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 PRORSD1PA6NEY8 169 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 LIPT2A6NK58 231 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 DEFB108AA8MXU0 73 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 PDLIM1O00151 329 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SULT2B1O00204 365 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 MRASO14807 208 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 FRS3O43559 492 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SNX3O60493 162 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 RAMP1O60894 148 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 CYP7B1O75881 506 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 PRKD3O94806 890 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 THBDP07204 575 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 FESP07332 822 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 COX5AP20674 150 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SLC7A1P30825 629 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 LSP1P33241 339 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 CPA2P48052 419 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 KCNJ5P48544 419 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SEC24CP53992 1094 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 VEZF1Q14119 521 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SLC17A1Q14916 467 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 NPTX1Q15818 432 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 VMACQ2NL98 169 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 FAM91A1Q658Y4 838 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 REP15Q6BDI9 236 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 PAQR6Q6TCH4 344 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 HACD2Q6Y1H2 254 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 PIGWQ7Z7B1 504 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 CDH24Q86UP0 819 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 TSPYL5Q86VY4 417 aaPredicted RBP7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SNX32Q86XE0 403 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SLC30A8Q8IWU4 369 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 TUSC5Q8IXB3 177 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 CNEP1R1Q8N9A8 125 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 ZIC4Q8N9L1 334 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 RP9Q8TA86 221 aaKnown RBP7.8□□□□□ -1.16
SSBP4-208ENST00000600628 STK35Q8TDR2 534 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 SLC38A4Q969I6 547 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 TAMM41Q96BW9 452 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 BOD1Q96IK1 185 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 WFIKKN1Q96NZ8 548 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 OR5B2Q96R09 309 aa7.8□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF426Q9BUY5 554 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms