RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 CAV3P56539 151 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 ZNF117Q03924 483 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 OXA1LQ15070 435 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 WBP2NLQ6ICG8 309 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 WDR5BQ86VZ2 330 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 NLGN4YQ8NFZ3 816 aaPredicted RBP13.22□□□□□ -0.29
VRK3-217ENST00000599538 OR10H4Q8NGA5 316 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 OR52N1Q8NH53 320 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 MOSPD2Q8NHP6 518 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 DUSP23Q9BVJ7 150 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 JAM3Q9BX67 310 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 MROQ9BYG7 248 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 TTTY10Q9BZA0 68 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 SLC7A5P2Q9GIP4 190 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 HOXD1Q9GZZ0 328 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 GAREM1Q9H706 876 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 ADGRL4Q9HBW9 690 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 APMAPQ9HDC9 416 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 ABCB10Q9NRK6 738 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
VRK3-217ENST00000599538 ELOA3DA6NLF2 546 aaPredicted RBP13.21□□□□□ -0.29
VRK3-217ENST00000599538 E9PI62 339 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 OR7A10O76100 309 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 ZNF3P17036 446 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 ABCD3P28288 659 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 RGS19P49795 217 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 LTBQ06643 244 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 ELOA3BQ3SY89 546 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 CD200R1LQ6Q8B3 271 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 PRR23CQ6ZRP0 262 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 SSX6Q7RTT6 188 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 ELOA3Q8NG57 546 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 OR14A16Q8NHC5 309 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 OMA1Q96E52 524 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 SMURF1Q9HCE7 757 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 PRMT8Q9NR22 394 aaPredicted RBP13.21□□□□□ -0.29
VRK3-217ENST00000599538 KLHL1Q9NR64 748 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 ETAA1Q9NY74 926 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 PEX16Q9Y5Y5 336 aa13.21□□□□□ -0.29
VRK3-217ENST00000599538 SLC30A4O14863 429 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 KHNYNO15037 678 aaKnown RBP13.21□□□□□ -0.3
VRK3-217ENST00000599538 MAGEB4O15481 346 aaPredicted RBP13.21□□□□□ -0.3
VRK3-217ENST00000599538 ZNF354AO60765 605 aaPredicted RBP13.21□□□□□ -0.3
VRK3-217ENST00000599538 SBK2P0C263 348 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 IL12BP29460 328 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 TNFSF8P32971 234 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 RORCP51449 518 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 ERVK-25P63136 954 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 PLCXD2Q0VAA5 305 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 HNRNPA0Q13151 305 aaKnown RBP13.21□□□□□ -0.3
VRK3-217ENST00000599538 TBC1D25Q3MII6 688 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 HLA-DQA1Q5Y7H0 255 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 LCN10Q6JVE6 187 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 ARHGAP11AQ6P4F7 1023 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 CCDC190Q86UF4 302 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 LYSMD2Q8IV50 215 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 SLITRK4Q8IW52 837 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 ZNF440Q8IYI8 595 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 ARIH2OSQ8N7S6 290 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 ZNF441Q8N8Z8 693 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 PLPP5Q8NEB5 264 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 ATP6V1C2Q8NEY4 427 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 EDAQ92838 391 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 RELTQ969Z4 430 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 RASD2Q96D21 266 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 ZMYND19Q96E35 227 aaPredicted RBP13.21□□□□□ -0.3
VRK3-217ENST00000599538 NMNAT3Q96T66 252 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 SDHCQ99643 169 aaPredicted RBP13.21□□□□□ -0.3
VRK3-217ENST00000599538 CCDC86Q9H6F5 360 aaKnown RBP13.21□□□□□ -0.3
VRK3-217ENST00000599538 ZMIZ1Q9ULJ6 1067 aa13.21□□□□□ -0.3
VRK3-217ENST00000599538 A0A075B6Q4 140 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 DAPL1A0PJW8 107 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 CD8B2A6NJW9 211 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 SLC22A31A6NKX4 558 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 TAF4O00268 1085 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 RGS5O15539 181 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 HCRTR2O43614 444 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 UPK1BO75841 260 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 CD8BP10966 210 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 PNLIPP16233 465 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 TGM1P22735 817 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 RPL4P36578 427 aaKnown RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 AQP2P41181 271 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 RPS4XP62701 263 aaKnown RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 ZXDAP98168 799 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 ZNF85Q03923 595 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 ACSM1Q08AH1 577 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 YOD1Q5VVQ6 348 aaPredicted RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 STEAP3Q658P3 488 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 POMZP3Q6PJE2 187 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 LYPD4Q6UWN0 246 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 LAX1Q8IWV1 398 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 FAM98AQ8NCA5 519 aaKnown RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 SLC25A46Q96AG3 418 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 KTI12Q96EK9 354 aaPredicted RBP13.2□□□□□ -0.3
VRK3-217ENST00000599538 CCDC74BQ96LY2 380 aa13.2□□□□□ -0.3
VRK3-217ENST00000599538 KCTD7Q96MP8 289 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms