RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	LINC00299	Q6ZSB3	139 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	CYP4Z1	Q86W10	505 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	SETD9	Q8NE22	299 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	OR4M1	Q8NGD0	313 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	TNFRSF14	Q92956	283 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	RBCK1	Q9BYM8	510 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	RNF167	Q9H6Y7	350 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	FBXO8	Q9NRD0	319 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	CLEC5A	Q9NY25	188 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	TRPC4	Q9UBN4	977 aa		10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	CDV3	Q9UKY7	258 aa	Known RBP	10.52	□□□□□ -0.72
SUPT5H-216	ENST00000599335	FAM74A7	A6NL05	159 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ARPC5	O15511	151 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	TGOLN2	O43493	480 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SYP	P08247	313 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	STAT5A	P42229	794 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	GZMM	P51124	257 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	TAS2R38	P59533	333 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SCN1B	Q07699	218 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	FAM74A3	Q4VXF1	159 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	LINGO2	Q7L985	606 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	LHFPL3	Q86UP9	236 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ARL14	Q8N4G2	192 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	DEFB124	Q8NES8	71 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PRO1933	Q9H354	126 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	FTSJ1	Q9UET6	329 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	GPR160	Q9UJ42	338 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RNF215	Q9Y6U7	377 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ERAL1	O75616	437 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	OPN1MW	P04001	364 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	OPN1MW2	P0DN77	364 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	OPN1MW3	P0DN78	364 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PTGER1	P34995	402 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	AHR	P35869	848 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RGS6	P49758	472 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	NOVA1	P51513	510 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	EXOSC2	Q13868	293 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CTU2	Q2VPK5	515 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	KRTCAP3	Q53RY4	240 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RBM48	Q5RL73	367 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RIPPLY2	Q5TAB7	128 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SLC46A3	Q7Z3Q1	461 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PDZD3	Q86UT5	571 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	BBS10	Q8TAM1	723 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RAB8B	Q92930	207 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	MISP3	Q96FF7	219 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RDH12	Q96NR8	316 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	MRPL37	Q9BZE1	423 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SLC6A16	Q9GZN6	736 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RHCG	Q9UBD6	479 aa		10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PURG	Q9UJV8	347 aa	Known RBP	10.52	□□□□□ -0.73
SUPT5H-216	ENST00000599335	GLOD5	A6NK44	160 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PRSS23	O95084	383 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PPP2R1B	P30154	601 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RPL3	P39023	403 aa	Known RBP	10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PTGFR	P43088	359 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SSR2	P43308	183 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	DAP	P51397	102 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CDK6	Q00534	326 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ODF1	Q14990	250 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SLC5A12	Q1EHB4	618 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CBLL1	Q75N03	491 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	OOSP2	Q86WS3	158 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	BBS1	Q8NFJ9	593 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	OR4C6	Q8NH72	309 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ROBO4	Q8WZ75	1007 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	OTUB1	Q96FW1	271 aa	Predicted RBP	10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RHNO1	Q9BSD3	238 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	USE1	Q9NZ43	259 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PPIE	Q9UNP9	301 aa	Known RBP	10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CELSR3	Q9NYQ7	3312 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ZFYVE26	Q68DK2	2539 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	METTL12	A8MUP2	240 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SLC1A7	O00341	560 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SOX30	O94993	753 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ALPPL2	P10696	532 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	ZNF35	P13682	527 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CD27	P26842	260 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SSTR2	P30874	369 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CCR8	P51685	355 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	NR0B1	P51843	470 aa	Known RBP	10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	NUDT6	P53370	316 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	MC2R	Q01718	297 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	HLA-B	Q31612	363 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	DYNC2LI1	Q8TCX1	351 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	LCN9	Q8WX39	176 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	UBE2F	Q969M7	185 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	KCNJ15	Q99712	375 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PRRX2	Q99811	253 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	SGPP1	Q9BX95	441 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PRAMEF33	A0A0G2JMD5	474 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CXorf65	A6NEN9	183 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PRR33	A8MZF0	331 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	RNASET2	O00584	256 aa	Known RBP	10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	PAPLN	O95428	1278 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	CLEC3B	P05452	202 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	FURIN	P09958	794 aa		10.51	□□□□□ -0.73
SUPT5H-216	ENST00000599335	EPHA2	P29317	976 aa		10.51	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms