RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 EDNRAP25101 427 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 IDH3AP50213 366 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 OR2B6P58173 313 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 STX1BP61266 288 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 SLC35A1P78382 337 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 IRX1P78414 480 aaPredicted RBP15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 RNF220Q5VTB9 566 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 PRAMEF8Q5VWM4 474 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 PRAMEF7Q5VXH5 474 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 ZNF836Q6ZNA1 936 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 BIVMQ86UB2 503 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 P2RY8Q86VZ1 359 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 VRK2Q86Y07 508 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 C18orf12Q96KH6 178 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 ESRP2Q9H6T0 727 aaKnown RBP15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 TMEM45AQ9NWC5 275 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 NOSIPQ9Y314 301 aaKnown RBP15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 IFT52Q9Y366 437 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 PCDHB14Q9Y5E9 798 aa15.86■□□□□ 0.13
CHMP2A-203ENST00000597209 SETD2Q9BYW2 2564 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 DSCAMO60469 2012 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 TMEM247A6NEH6 219 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 IMPDH2P12268 514 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 HOXB9P17482 250 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 CCNA2P20248 432 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 IGHV1-2P23083 117 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 ACAA2P42765 397 aaKnown RBP15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 FADDQ13158 208 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 LARS2Q15031 903 aaKnown RBP15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 RGNQ15493 299 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 Q5PR19 223 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 TIMM23BQ5SRD1 257 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 C6orf10Q5SRN2 563 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 FBXW9Q5XUX1 488 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 SEZ6L2Q6UXD5 910 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 AURKBQ96GD4 344 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 TMEM19Q96HH6 336 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 NAA11Q9BSU3 229 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 SPATA9Q9BWV2 254 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 ARMC7Q9H6L4 198 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 BCL2L10Q9HD36 194 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 SLCO1B3Q9NPD5 702 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 ZNF232Q9UNY5 417 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 ZNF443Q9Y2A4 671 aaPredicted RBP15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 RNF115Q9Y4L5 304 aa15.85■□□□□ 0.13
CHMP2A-203ENST00000597209 FLNAP21333 2647 aaKnown RBP15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 ACANP16112 2415 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 A0A096LPI6 279 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 CLIC1O00299 241 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 LYZL6O75951 148 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 CD3EP07766 207 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 TTMPQ5BVD1 217 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 LRIF1Q5T3J3 769 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 WBP2NLQ6ICG8 309 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 SLC2A7Q6PXP3 512 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 BLOC1S3Q6QNY0 202 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 FUNDC1Q8IVP5 155 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 CCDC103Q8IW40 242 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 ZNF433Q8N7K0 673 aaPredicted RBP15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 TMEM171Q8WVE6 324 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 AKAP1Q92667 903 aaKnown RBP eCLIP15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 SLC35B4Q969S0 331 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 APH1AQ96BI3 265 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 A4GALTQ9NPC4 353 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 ZNF701Q9NV72 531 aaPredicted RBP15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 RLIMQ9NVW2 624 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 GMEB1Q9Y692 573 aa15.84■□□□□ 0.13
CHMP2A-203ENST00000597209 RAMP1O60894 148 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 MRPL33O75394 65 aaKnown RBP15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 GGT1P19440 569 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 CXCR1P25024 350 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 PTH2RP49190 550 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 ATP4BP51164 291 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 COPZ1P61923 177 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 CAPRIN1Q14444 709 aaKnown RBP15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 PPA1Q15181 289 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 KRTAP21-3Q3LHN1 58 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 PAQR6Q6TCH4 344 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 CLIP4Q8N3C7 705 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 GOLGA6L1Q8N7Z2 621 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 LILRB1Q8NHL6 650 aaPredicted RBP15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 STON2Q8WXE9 905 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 MUCL1Q96DR8 90 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 EBF4Q9BQW3 602 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 GSX1Q9H4S2 264 aaPredicted RBP15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 CXorf56Q9H5V9 222 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 PIF1Q9H611 641 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 CACYBPQ9HB71 228 aaKnown RBP15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 SLC52A3Q9NQ40 469 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 PARPBPQ9NWS1 579 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 MALT1Q9UDY8 824 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 CHST2Q9Y4C5 530 aa15.83■□□□□ 0.12
CHMP2A-203ENST00000597209 VPS13CQ709C8 3753 aa15.82■□□□□ 0.12
CHMP2A-203ENST00000597209 ZC3H12DA2A288 527 aaKnown RBP15.82■□□□□ 0.12
CHMP2A-203ENST00000597209 DPRXA6NFQ7 191 aa15.82■□□□□ 0.12
CHMP2A-203ENST00000597209 OR5H1A6NKK0 313 aa15.82■□□□□ 0.12
CHMP2A-203ENST00000597209 INHBBP09529 407 aa15.82■□□□□ 0.12
CHMP2A-203ENST00000597209 GKN3PP0CG01 181 aa15.82■□□□□ 0.12
CHMP2A-203ENST00000597209 NTF4P34130 210 aa15.82■□□□□ 0.12
CHMP2A-203ENST00000597209 IDUAP35475 653 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms