RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 ABHD4Q8TB40 342 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 ADAMTS18Q8TE60 1221 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 MSANTD3Q96H12 275 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 DEPDC7Q96QD5 511 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 NMNAT3Q96T66 252 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 HAO2Q9NYQ3 351 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 TLCD2A6NGC4 264 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 B4DXG7 233 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 PSMD4P55036 377 aaKnown RBP20.79■□□□□ 0.92
SRRM1-222ENST00000596378 ATAD3CQ5T2N8 411 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 TRIQKQ629K1 86 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 CBLN3Q6UW01 205 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 LYPD4Q6UWN0 246 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 PTPMT1Q8WUK0 201 aaPredicted RBP20.79■□□□□ 0.92
SRRM1-222ENST00000596378 ITFG2Q969R8 447 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 RASD2Q96D21 266 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 KLHDC3Q9BQ90 382 aa20.79■□□□□ 0.92
SRRM1-222ENST00000596378 ASXL3Q9C0F0 2248 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 A0A1B0GVC2 190 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 A0A1W2PPK0 400 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 BLACEA4D250 179 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 A6NIN4 97 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 ALAS2P22557 587 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 F8A1P23610 371 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 UBXN2BQ14CS0 331 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 KLHL26Q53HC5 615 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 CMIPQ8IY22 773 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 GHSRQ92847 366 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 TSLPQ969D9 159 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 ZNF524Q96C55 264 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.78■□□□□ 0.92
SRRM1-222ENST00000596378 ICAM5Q9UMF0 924 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 SEC16AO15027 2179 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 IGKV1D-42A0A075B6H8 117 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 A0A0B4J293 547 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 ERVK-25P63136 954 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.78■□□□□ 0.92
SRRM1-222ENST00000596378 COL13A1Q5TAT6 717 aaPredicted RBP20.78■□□□□ 0.92
SRRM1-222ENST00000596378 TTYH1Q9H313 450 aaPredicted RBP20.78■□□□□ 0.92
SRRM1-222ENST00000596378 SLC2A4RGQ9NR83 387 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 LANCL2Q9NS86 450 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 NPAP1Q9NZP6 1156 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 EXTL2Q9UBQ6 330 aa20.78■□□□□ 0.92
SRRM1-222ENST00000596378 GMFGO60234 142 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 TDGQ13569 410 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 HBMQ6B0K9 141 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 DMKNQ6E0U4 476 aaPredicted RBP20.77■□□□□ 0.92
SRRM1-222ENST00000596378 APOOLQ6UXV4 268 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 PRR22Q8IZ63 422 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 C19orf18Q8NEA5 215 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 MOSPD2Q8NHP6 518 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 SLC35B4Q969S0 331 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 OR8D2Q9GZM6 311 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 NXF5Q9H1B4 397 aaKnown RBP20.77■□□□□ 0.92
SRRM1-222ENST00000596378 UCK1Q9HA47 277 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 NEK6Q9HC98 313 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 DHCR7Q9UBM7 475 aaKnown RBP20.77■□□□□ 0.92
SRRM1-222ENST00000596378 ST6GALNAC2Q9UJ37 374 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 ZNF221Q9UK13 617 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 RASD1Q9Y272 281 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 A0A0G2JMP0 313 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 A0A0X1KG70 313 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 CFL1P23528 166 aaKnown RBP20.77■□□□□ 0.92
SRRM1-222ENST00000596378 THBS2P35442 1172 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 ACTC1P68032 377 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 ACTA1P68133 377 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 RDH10Q8IZV5 341 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 OR4M2Q8NGB6 313 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 ENKURQ8TC29 256 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 PHOSPHO1Q8TCT1 267 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 SLC2A12Q8TD20 617 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 CNN2Q99439 309 aaKnown RBP20.77■□□□□ 0.92
SRRM1-222ENST00000596378 FOXQ1Q9C009 403 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 GMEB2Q9UKD1 530 aa20.77■□□□□ 0.92
SRRM1-222ENST00000596378 OR6C68A6NDL8 312 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 SELENOFO60613 162 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 SLC37A1P57057 533 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 SLC25A35Q3KQZ1 300 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 ACSM3Q53FZ2 586 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 TCTE1Q5JU00 501 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 SNAP47Q5SQN1 464 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 SYT9Q86SS6 491 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 NPEPL1Q8NDH3 523 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 FAM174AQ8TBP5 190 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 DMRTB1Q96MA1 342 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 ZNF578Q96N58 590 aaPredicted RBP20.76■□□□□ 0.91
SRRM1-222ENST00000596378 PHF7Q9BWX1 381 aaPredicted RBP20.76■□□□□ 0.91
SRRM1-222ENST00000596378 PRODH2Q9UF12 536 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 EML5Q05BV3 1969 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 FAM171A2A8MVW0 826 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 OR7A10O76100 309 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 PAHP00439 452 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 HLA-DQB1P01920 261 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 KRT8P05787 483 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 EIF4EP06730 217 aaKnown RBP20.76■□□□□ 0.91
SRRM1-222ENST00000596378 TAS2R43P59537 309 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 RPL6Q02878 288 aaKnown RBP20.76■□□□□ 0.91
SRRM1-222ENST00000596378 POU4F2Q12837 409 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 SFXN4Q6P4A7 337 aa20.76■□□□□ 0.91
SRRM1-222ENST00000596378 METAP1DQ6UB28 335 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms