RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 PAMR1Q6UXH9 720 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 FOXC2Q99958 501 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 CPPED1Q9BRF8 314 aaPredicted RBP11.59□□□□□ -0.55
USE1-207ENST00000596136 POTEKPQ9BYX7 375 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 KLHL4Q9C0H6 718 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 ARMC7Q9H6L4 198 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 ITGB1BP2Q9UKP3 347 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 CORO2BQ9UQ03 480 aa11.59□□□□□ -0.55
USE1-207ENST00000596136 ZNF469Q96JG9 3925 aaPredicted RBP11.58□□□□□ -0.56
USE1-207ENST00000596136 VPS13CQ709C8 3753 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 UQCRHLA0A096LP55 91 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 A0A0G2JND7 137 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 EVPLLA8MZ36 301 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 KLF4O43474 513 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 EIF1BO60739 113 aaKnown RBP11.58□□□□□ -0.56
USE1-207ENST00000596136 CNOT4O95628 575 aaKnown RBP11.58□□□□□ -0.56
USE1-207ENST00000596136 IMPDH2P12268 514 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 PRG2P13727 222 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 PRKAR1BP31321 381 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 CDK6Q00534 326 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 P2RY6Q15077 328 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 ZNF311Q5JNZ3 666 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 SFRP5Q5T4F7 317 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 Q6ZT83 130 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 RETREG3Q86VR2 466 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 STEAP2Q8NFT2 490 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 DDIT4LQ96D03 193 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 ZHX1-C8orf76Q96EF9 292 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 ZNF300Q96RE9 604 aaPredicted RBP11.58□□□□□ -0.56
USE1-207ENST00000596136 USB1Q9BQ65 265 aaKnown RBP11.58□□□□□ -0.56
USE1-207ENST00000596136 CCDC134Q9H6E4 229 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 CCM2LQ9NUG4 571 aaPredicted RBP11.58□□□□□ -0.56
USE1-207ENST00000596136 C6orf203Q9P0P8 240 aaPredicted RBP11.58□□□□□ -0.56
USE1-207ENST00000596136 NDUFAF1Q9Y375 327 aa11.58□□□□□ -0.56
USE1-207ENST00000596136 ZC3H12DA2A288 527 aaKnown RBP11.57□□□□□ -0.56
USE1-207ENST00000596136 C5orf58C9J3I9 102 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 NPIPB7O75200 414 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 ATE1O95260 518 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 RAF1P04049 648 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 DNASE1P24855 282 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 ART1P52961 327 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 COPZ1P61923 177 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 SLC35A1P78382 337 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 FBXW10Q5XX13 1052 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 ANKRD34AQ69YU3 496 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 CGB2Q6NT52 195 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 DHRS4L2Q6PKH6 230 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 GALNT5Q7Z7M9 940 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 SERPINA11Q86U17 422 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 CXorf67Q86X51 503 aaPredicted RBP11.57□□□□□ -0.56
USE1-207ENST00000596136 LSMEM1Q8N8F7 131 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 NFKBIDQ8NI38 313 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 PIGXQ8TBF5 258 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 C3orf49Q96BT1 292 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 ANKRD27Q96NW4 1050 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 CGREF1Q99674 301 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 TMEM120AQ9BXJ8 343 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 ACTR6Q9GZN1 396 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 CACYBPQ9HB71 228 aaKnown RBP11.57□□□□□ -0.56
USE1-207ENST00000596136 MRGBPQ9NV56 204 aa11.57□□□□□ -0.56
USE1-207ENST00000596136 LIPT2A6NK58 231 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 A8MVM7 634 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 TMEM229AB2RXF0 380 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 GPR171O14626 319 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 RAMP1O60894 148 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 ADAP00813 363 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 TROVE2P10155 538 aaKnown RBP eCLIP11.56□□□□□ -0.56
USE1-207ENST00000596136 CCNA2P20248 432 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 CXCR1P25024 350 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 EDNRAP25101 427 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 NTF4P34130 210 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 PCBP3P57721 371 aaKnown RBP11.56□□□□□ -0.56
USE1-207ENST00000596136 OR2B6P58173 313 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 ITGADQ13349 1161 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 SCARB2Q14108 478 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 POU4F3Q15319 338 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 PAQR6Q6TCH4 344 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 C6orf89Q6UWU4 347 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 NET1Q7Z628 596 aaPredicted RBP11.56□□□□□ -0.56
USE1-207ENST00000596136 DHDDSQ86SQ9 333 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
USE1-207ENST00000596136 PTOV1Q86YD1 416 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 ZNF775Q96BV0 537 aaPredicted RBP11.56□□□□□ -0.56
USE1-207ENST00000596136 ALPK1Q96QP1 1244 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 SPATA5L1Q9BVQ7 753 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 PIF1Q9H611 641 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 C12orf10Q9HB07 376 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 MED4Q9NPJ6 270 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 EMC3Q9P0I2 261 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.56□□□□□ -0.56
USE1-207ENST00000596136 PLEKHA6Q9Y2H5 1048 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 CADP27708 2225 aa11.56□□□□□ -0.56
USE1-207ENST00000596136 RAI1Q7Z5J4 1906 aaPredicted RBP11.56□□□□□ -0.56
USE1-207ENST00000596136 ARID1AO14497 2285 aa11.55□□□□□ -0.56
USE1-207ENST00000596136 FBP2O00757 339 aa11.55□□□□□ -0.56
USE1-207ENST00000596136 ANGPT2O15123 496 aa11.55□□□□□ -0.56
USE1-207ENST00000596136 ATP8B1O43520 1251 aa11.55□□□□□ -0.56
USE1-207ENST00000596136 TPST1O60507 370 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms