RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 FAM168AQ92567 244 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 KCNK17Q96T54 332 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 LGALS13Q9UHV8 139 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 CDC42EP3Q9UKI2 254 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 FLVCR1Q9Y5Y0 555 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 ATP23Q9Y6H3 246 aa14.34□□□□□ -0.11
LIG1-205ENST00000593425 PLCE1Q9P212 2302 aa14.33□□□□□ -0.11
LIG1-205ENST00000593425 TMEM72A0PK05 275 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 AP3D1O14617 1153 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 ITM2AO43736 263 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 AGR2O95994 175 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 GUSBP08236 651 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 IMPDH2P12268 514 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 MAGEA8P43361 318 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 KCNJ10P78508 379 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 H3F3AP84243 136 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 ATAD3BQ5T9A4 648 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 TSPO2Q5TGU0 170 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 SAXO2Q658L1 398 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 OR7E24Q6IFN5 339 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 DEPDC4Q8N2C3 294 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 OIT3Q8WWZ8 545 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 CNOT9Q92600 299 aaKnown RBP14.33□□□□□ -0.12
LIG1-205ENST00000593425 EXOSC3Q9NQT5 275 aaKnown RBP14.33□□□□□ -0.12
LIG1-205ENST00000593425 POLE3Q9NRF9 147 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 SLC7A10Q9NS82 523 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 TMEM160Q9NX00 188 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 TMEM181Q9P2C4 612 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 PCDHGB4Q9UN71 923 aa14.33□□□□□ -0.12
LIG1-205ENST00000593425 TMED7-TICAM2A0A0A6YYA0 188 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 NUDT17P0C025 328 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 IGHV4-31P0DP07 118 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 UQCRC2P22695 453 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 ETV4P43268 484 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 IDH2P48735 452 aaKnown RBP14.32□□□□□ -0.12
LIG1-205ENST00000593425 CLK1P49759 484 aaKnown RBP14.32□□□□□ -0.12
LIG1-205ENST00000593425 KHKP50053 298 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 SMU1Q2TAY7 513 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 KRTAP24-1Q3LI83 254 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 AP1ARQ63HQ0 302 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 ARFGAP2Q8N6H7 521 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 ARIH2OSQ8N7S6 290 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 ZNF781Q8N8C0 355 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 C1orf162Q8NEQ5 155 aaPredicted RBP14.32□□□□□ -0.12
LIG1-205ENST00000593425 PKNOX2Q96KN3 472 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 BEX2Q9BXY8 128 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 DPY30Q9C005 99 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 AKTIPQ9H8T0 292 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 SLC17A5Q9NRA2 495 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.32□□□□□ -0.12
LIG1-205ENST00000593425 UPB1Q9UBR1 384 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 DCTN4Q9UJW0 460 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 OSGIN1Q9UJX0 560 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 TRAPPC4Q9Y296 219 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 TMED7Q9Y3B3 224 aa14.32□□□□□ -0.12
LIG1-205ENST00000593425 PRSS51A0A1B0GVH4 220 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 ZC3H12DA2A288 527 aaKnown RBP14.31□□□□□ -0.12
LIG1-205ENST00000593425 ATP6V1G2-DDX39BF2Z307 99 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 EFNA4P52798 201 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 GPAT3Q53EU6 434 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 SPANXN4Q5MJ08 99 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 CYB5R2Q6BCY4 276 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 C17orf78Q8N4C9 275 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 PROX1Q92786 737 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 NEURL3Q96EH8 262 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 ZIM3Q96PE6 472 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 HEATR1Q9H583 2144 aaKnown RBP14.31□□□□□ -0.12
LIG1-205ENST00000593425 MARCOQ9UEW3 520 aaPredicted RBP14.31□□□□□ -0.12
LIG1-205ENST00000593425 SLC9A8Q9Y2E8 581 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 AMDHD2Q9Y303 409 aa14.31□□□□□ -0.12
LIG1-205ENST00000593425 STAB1Q9NY15 2570 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 HMGN4O00479 90 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 TYROBPO43914 113 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 F12P00748 615 aaPredicted RBP14.3□□□□□ -0.12
LIG1-205ENST00000593425 CSF3P09919 207 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 USF1P22415 310 aaPredicted RBP14.3□□□□□ -0.12
LIG1-205ENST00000593425 FKBP2P26885 142 aaKnown RBP14.3□□□□□ -0.12
LIG1-205ENST00000593425 TACR3P29371 465 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 APOBEC3AP31941 199 aaPredicted RBP14.3□□□□□ -0.12
LIG1-205ENST00000593425 SLC35A1P78382 337 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 HPCAP84074 193 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 CASP8Q14790 479 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 SLC17A1Q14916 467 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 SYPL1Q16563 259 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 ANKFN1Q8N957 763 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 TESCQ96BS2 214 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 DDIT4LQ96D03 193 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 SLC35A5Q9BS91 424 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 C20orf27Q9GZN8 174 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 SLC38A1Q9H2H9 487 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 FKRPQ9H9S5 495 aa14.3□□□□□ -0.12
LIG1-205ENST00000593425 ARFGEF3Q5TH69 2177 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 VWC2LB2RUY7 222 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 ZNF208O43345 1280 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 LMX1BO60663 402 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 CHRM4P08173 479 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 IGFBP5P24593 272 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 CHI3L1P36222 383 aaPredicted RBP14.29□□□□□ -0.12
LIG1-205ENST00000593425 HTR3AP46098 478 aa14.29□□□□□ -0.12
LIG1-205ENST00000593425 POLR2HP52434 150 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms