RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CMC2Q9NRP2 79 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 C14orf105Q9NVL8 296 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SIDT1Q9NXL6 827 aaKnown RBP13.13□□□□□ -0.31
RANBP3-229ENST00000592771 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
RANBP3-229ENST00000592771 C2orf92A0A1B0GVN3 265 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 A0A1B0GVT2 93 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 DAPL1A0PJW8 107 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 CDC42EP2O14613 210 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 PIP5K1CO60331 668 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 NCR1O76036 304 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 NTN1O95631 604 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 PRKCAP17252 672 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 NPR2P20594 1047 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 HTR2AP28223 471 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 HOXA6P31267 233 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 GPR3P46089 330 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 OR1D5P58170 312 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 C19orf57Q0VDD7 668 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 MRPL28Q13084 256 aaKnown RBP13.12□□□□□ -0.31
RANBP3-229ENST00000592771 HSD17B12Q53GQ0 312 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 ZNF57Q68EA5 555 aaPredicted RBP13.12□□□□□ -0.31
RANBP3-229ENST00000592771 PAMR1Q6UXH9 720 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 NANOGNBQ7Z5D8 188 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 ZAR1Q86SH2 424 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 SLC35F3Q8IY50 421 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 UBE2J2Q8N2K1 259 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 OR7G1Q8NGA0 311 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 OR5W2Q8NH69 310 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 FANK1Q8TC84 345 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 RFT1Q96AA3 541 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 MMABQ96EY8 250 aaPredicted RBP13.12□□□□□ -0.31
RANBP3-229ENST00000592771 HYLS1Q96M11 299 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 ZNF578Q96N58 590 aaPredicted RBP13.12□□□□□ -0.31
RANBP3-229ENST00000592771 HAO2Q9NYQ3 351 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 PTTG3PQ9NZH4 202 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 RABL2AQ9UBK7 228 aaPredicted RBP13.12□□□□□ -0.31
RANBP3-229ENST00000592771 RABL2BQ9UNT1 228 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 NPFFR2Q9Y5X5 522 aa13.12□□□□□ -0.31
RANBP3-229ENST00000592771 NPIPA5A0A0B4J1W7 369 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 NPIPA7E9PJI5 369 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ZNF780AO75290 641 aaPredicted RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 SLC2A10O95528 541 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ZGLP1P0C6A0 271 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 NPIPA8P0DM63 369 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 PRG2P13727 222 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 CD1CP29017 333 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 PITPNBP48739 271 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 BTG2P78543 158 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 CFHR1Q03591 330 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 FUT7Q11130 342 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 POU4F2Q12837 409 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ERV3-1Q14264 604 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 SHBQ15464 509 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 Q5BKY6 102 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 PYHIN1Q6K0P9 492 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 PLBD1Q6P4A8 553 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 CDH24Q86UP0 819 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 C11orf74Q86VG3 221 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 MS4A15Q8N5U1 240 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 OR51Q1Q8NH59 317 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 TMEM239Q8WW34 195 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 RBM18Q96H35 190 aaKnown RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 NECAB3Q96P71 396 aaPredicted RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 DGAT2Q96PD7 388 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 MALT1Q9UDY8 824 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 CLCA3PQ9Y6N3 262 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 SDK1Q7Z5N4 2213 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ANKRD61A6NGH8 418 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 A6NL46 340 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 HRKO00198 91 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 PRAMEF2O60811 474 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 CDC123O75794 336 aaPredicted RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 DHFRP00374 187 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 IGKV1D-16P01601 117 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 GLB1P16278 677 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 DRD5P21918 477 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 CTBP2P56545 445 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ACTC1P68032 377 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ACTA1P68133 377 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 GALK2Q01415 458 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 BIKQ13323 160 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ZNHIT3Q15649 155 aaPredicted RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 SNAP47Q5SQN1 464 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 GRAMD2AQ8IUY3 354 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 GHDCQ8N2G8 530 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 MVB12AQ96EY5 273 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 LRFN5Q96NI6 719 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 TIMP4Q99727 224 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 PELOQ9BRX2 385 aaKnown RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 MFRPQ9BY79 579 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 HDHD2Q9H0R4 259 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
RANBP3-229ENST00000592771 LANCL2Q9NS86 450 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 COPZ2Q9P299 210 aa13.11□□□□□ -0.31
RANBP3-229ENST00000592771 UNC13CQ8NB66 2214 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms