RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 GPAT3Q53EU6 434 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 AP1ARQ63HQ0 302 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 CASP12Q6UXS9 341 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 MUC15Q8N387 334 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 ZNF781Q8N8C0 355 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 OR10H5Q8NGA6 315 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 TESCQ96BS2 214 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 NEURL3Q96EH8 262 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 MUS81Q96NY9 551 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 C1QTNF6Q9BXI9 259 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 TMEM181Q9P2C4 612 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 MARCOQ9UEW3 520 aaPredicted RBP13.84□□□□□ -0.19
CIRBP-230ENST00000591055 TRAPPC4Q9Y296 219 aa13.84□□□□□ -0.19
CIRBP-230ENST00000591055 TMED7-TICAM2A0A0A6YYA0 188 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 CLDN24A6NM45 220 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 GPRIN2O60269 458 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 SERPINE1P05121 402 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 ITGA5P08648 1049 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 CLNS1AP54105 237 aaKnown RBP13.83□□□□□ -0.2
CIRBP-230ENST00000591055 FOXG1P55316 489 aaPredicted RBP13.83□□□□□ -0.2
CIRBP-230ENST00000591055 ABCE1P61221 599 aaKnown RBP13.83□□□□□ -0.2
CIRBP-230ENST00000591055 VSNL1P62760 191 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 SLC35A1P78382 337 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 CASP8Q14790 479 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 CHI3L2Q15782 390 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 SPANXN4Q5MJ08 99 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 B3GLCTQ6Y288 498 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 OR52E4Q8NGH9 312 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 CNOT9Q92600 299 aaKnown RBP13.83□□□□□ -0.2
CIRBP-230ENST00000591055 PMM1Q92871 262 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 SLC35A5Q9BS91 424 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 NAA11Q9BSU3 229 aaPredicted RBP13.83□□□□□ -0.2
CIRBP-230ENST00000591055 PARPBPQ9NWS1 579 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 UPB1Q9UBR1 384 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 SLC9A8Q9Y2E8 581 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 TMED7Q9Y3B3 224 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 RAP2CQ9Y3L5 183 aa13.83□□□□□ -0.2
CIRBP-230ENST00000591055 A0A096LNT2 108 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 PRAMEF27A3QJZ7 478 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 PDLIM1O00151 329 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 AP3D1O14617 1153 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 EIF1BO60739 113 aaKnown RBP13.82□□□□□ -0.2
CIRBP-230ENST00000591055 S100A3P33764 101 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 POLR2HP52434 150 aaKnown RBP13.82□□□□□ -0.2
CIRBP-230ENST00000591055 H3F3AP84243 136 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 PLAURQ03405 335 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 DPY19L1Q2PZI1 675 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 TMEM249Q2WGJ8 235 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 C9orf135Q5VTT2 229 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 ZNF544Q6NX49 715 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 CMIPQ8IY22 773 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 WDR31Q8NA23 367 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 HTRA1Q92743 480 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 DDIT4LQ96D03 193 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 TNFRSF13CQ96RJ3 184 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 INPP5KQ9BT40 448 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 DCTN4Q9UJW0 460 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 OSGIN1Q9UJX0 560 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.82□□□□□ -0.2
CIRBP-230ENST00000591055 AMDHD2Q9Y303 409 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 FLVCR1Q9Y5Y0 555 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 ATP23Q9Y6H3 246 aa13.82□□□□□ -0.2
CIRBP-230ENST00000591055 TMEM72A0PK05 275 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 ELOA3DA6NLF2 546 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-230ENST00000591055 HMGN4O00479 90 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 BIRC5O15392 142 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 ZNF208O43345 1280 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 IMPDH2P12268 514 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 SLC25A16P16260 332 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 LBPP18428 481 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 RPL14P50914 215 aaKnown RBP13.81□□□□□ -0.2
CIRBP-230ENST00000591055 TGFBR3Q03167 851 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 LOXL1Q08397 574 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-230ENST00000591055 SYPL1Q16563 259 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 ELOA3BQ3SY89 546 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 FAM174BQ3ZCQ3 159 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 C6orf52Q5T4I8 152 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 RNF130Q86XS8 419 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 C17orf78Q8N4C9 275 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 ZNF525Q8N782 197 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 ANKFN1Q8N957 763 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 C1orf162Q8NEQ5 155 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-230ENST00000591055 ELOA3Q8NG57 546 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 CCDC115Q96NT0 180 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 TRNT1Q96Q11 434 aaKnown RBP13.81□□□□□ -0.2
CIRBP-230ENST00000591055 AMBRA1Q9C0C7 1298 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 FKRPQ9H9S5 495 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 SLC17A5Q9NRA2 495 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 SLC7A10Q9NS82 523 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 BTNL2Q9UIR0 455 aa13.81□□□□□ -0.2
CIRBP-230ENST00000591055 YLPM1P49750 1951 aaKnown RBP13.81□□□□□ -0.2
CIRBP-230ENST00000591055 AGAP5A6NIR3 686 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 E9PBE3 544 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 H7C417 338 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 SNUPNO95149 360 aaKnown RBP13.8□□□□□ -0.2
CIRBP-230ENST00000591055 C1QCP02747 245 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 BMP4P12644 408 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 TACR3P29371 465 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 SLC1A3P43003 542 aa13.8□□□□□ -0.2
CIRBP-230ENST00000591055 SLC1A6P48664 564 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms