RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 ELAC2Q9BQ52 826 aaKnown RBP17.12■□□□□ 0.33
CIRBP-217ENST00000588230 ARMCX1Q9P291 453 aa17.12■□□□□ 0.33
CIRBP-217ENST00000588230 KLHL9Q9P2J3 617 aa17.12■□□□□ 0.33
CIRBP-217ENST00000588230 KLHL13Q9P2N7 655 aa17.12■□□□□ 0.33
CIRBP-217ENST00000588230 NDRG3Q9UGV2 375 aa17.12■□□□□ 0.33
CIRBP-217ENST00000588230 SLC13A4Q9UKG4 626 aa17.12■□□□□ 0.33
CIRBP-217ENST00000588230 SMAD9O15198 467 aaKnown RBP17.11■□□□□ 0.33
CIRBP-217ENST00000588230 PMS2P2O95744 297 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 YES1P07947 543 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 EPXP11678 715 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 PCYT1AP49585 367 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 OR2B6P58173 313 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 RASGEF1BQ0VAM2 473 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 TESK1Q15569 626 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 EXOC3L2Q2M3D2 409 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 MTDHQ86UE4 582 aaKnown RBP17.11■□□□□ 0.33
CIRBP-217ENST00000588230 TMEM200AQ86VY9 491 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 ARMC8Q8IUR7 673 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 SLC30A8Q8IWU4 369 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 BHLHE22Q8NFJ8 381 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-217ENST00000588230 TACO1Q9BSH4 297 aaKnown RBP17.11■□□□□ 0.33
CIRBP-217ENST00000588230 FAM107BQ9H098 131 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 C12orf49Q9H741 205 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 FANCFQ9NPI8 374 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 GID8Q9NWU2 228 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 KLHL28Q9NXS3 571 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 TMEM181Q9P2C4 612 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 TRAPPC4Q9Y296 219 aa17.11■□□□□ 0.33
CIRBP-217ENST00000588230 DYNC1I1O14576 645 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 DNPH1O43598 174 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 TPST1O60507 370 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 CYTIPO60759 359 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 CTAG2O75638 210 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 HOXC5Q00444 222 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 RABL3Q5HYI8 236 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 NET1Q7Z628 596 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-217ENST00000588230 OR8J3Q8NGG0 315 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 ECSITQ9BQ95 431 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 NSRP1Q9H0G5 558 aaKnown RBP17.1■□□□□ 0.33
CIRBP-217ENST00000588230 PIF1Q9H611 641 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 RPS6KB2Q9UBS0 482 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 ABCA4P78363 2273 aa17.1■□□□□ 0.33
CIRBP-217ENST00000588230 SH3D21A4FU49 640 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 C16orf97H3BN30 126 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 FXYD1O00168 92 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 CASKO14936 926 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 MFN2O95140 757 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 KLK2P20151 261 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 LSP1P33241 339 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 PCGF2P35227 344 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 PCBP3P57721 371 aaKnown RBP17.09■□□□□ 0.33
CIRBP-217ENST00000588230 SLC35A1P78382 337 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 DAZAP2Q15038 168 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-217ENST00000588230 INTS11Q5TA45 600 aaKnown RBP17.09■□□□□ 0.33
CIRBP-217ENST00000588230 BEND4Q6ZU67 534 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 NUFIP2Q7Z417 695 aaKnown RBP17.09■□□□□ 0.33
CIRBP-217ENST00000588230 CPLX4Q7Z7G2 160 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 PATL1Q86TB9 770 aaKnown RBP17.09■□□□□ 0.33
CIRBP-217ENST00000588230 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 RP9Q8TA86 221 aaKnown RBP17.09■□□□□ 0.33
CIRBP-217ENST00000588230 NRGNQ92686 78 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 DACH2Q96NX9 599 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 PSD2Q9BQI7 771 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 RSPO3Q9BXY4 272 aaPredicted RBP17.09■□□□□ 0.33
CIRBP-217ENST00000588230 POTEKPQ9BYX7 375 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 KLHL4Q9C0H6 718 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 BCO1Q9HAY6 547 aa17.09■□□□□ 0.33
CIRBP-217ENST00000588230 ZC3H12DA2A288 527 aaKnown RBP17.08■□□□□ 0.32
CIRBP-217ENST00000588230 GMNCA6NCL1 334 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 A6NNC1 897 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 M0QX08 132 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 UGT2B10P36537 528 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 GYS2P54840 703 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 RGS8P57771 180 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-217ENST00000588230 NCALDP61601 193 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 DMTNQ08495 405 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 BNIP2Q12982 314 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 COMTD1Q86VU5 262 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 SMYD1Q8NB12 490 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 OR52E4Q8NGH9 312 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 C3orf49Q96BT1 292 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 ZNF775Q96BV0 537 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-217ENST00000588230 RCN3Q96D15 328 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 TRIM2Q9C040 744 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 ING1Q9UK53 422 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-217ENST00000588230 FREM1Q5H8C1 2179 aa17.08■□□□□ 0.32
CIRBP-217ENST00000588230 ZNF724A8MTY0 619 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 A8MVM7 634 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 EIF1BO60739 113 aaKnown RBP17.07■□□□□ 0.32
CIRBP-217ENST00000588230 IMPDH2P12268 514 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 COX4I1P13073 169 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 FPR1P21462 350 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 DRD4P21917 467 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 IDUAP35475 653 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 GZMMP51124 257 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 GNGT1P63211 74 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 VMACQ2NL98 169 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 FBXW10Q5XX13 1052 aa17.07■□□□□ 0.32
CIRBP-217ENST00000588230 ATG4DQ86TL0 474 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms