RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 FOXK2Q01167 660 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 LTBQ06643 244 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 NPRL3Q12980 569 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 TBR1Q16650 682 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 BORAQ6PGQ7 559 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 CD300LDQ6UXZ3 194 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 YRDCQ86U90 279 aaKnown RBP10.22□□□□□ -0.77
VMP1-207ENST00000588131 LRRC17Q8N6Y2 441 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 OR8D4Q8NGM9 314 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 OR13C2Q8NGS9 318 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 ZCCHC14Q8WYQ9 949 aaKnown RBP10.22□□□□□ -0.77
VMP1-207ENST00000588131 ZBTB8AQ96BR9 441 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 KTI12Q96EK9 354 aaPredicted RBP10.22□□□□□ -0.77
VMP1-207ENST00000588131 SGTBQ96EQ0 304 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 PTDSS2Q9BVG9 487 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 TTTY12Q9BZ98 90 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 SLC19A3Q9BZV2 496 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 GRIP2Q9C0E4 1043 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 OR11A1Q9GZK7 315 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 UBQLN3Q9H347 655 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 EGLN3Q9H6Z9 239 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 ZNF703Q9H7S9 590 aaPredicted RBP10.22□□□□□ -0.77
VMP1-207ENST00000588131 PCDHGB6Q9Y5F9 930 aa10.22□□□□□ -0.77
VMP1-207ENST00000588131 PCDHGA9Q9Y5G4 932 aaKnown RBP10.22□□□□□ -0.77
VMP1-207ENST00000588131 ZFHX4Q86UP3 3567 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 A0A087WV48 116 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 LOC100130705A0A1B0GUX0 176 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 UNC119BA6NIH7 251 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 FAM166BA8MTA8 275 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 A8MVM7 634 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 H0YAE9 185 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 SLC16A6O15403 523 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 DENRO43583 198 aaKnown RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 OR7A10O76100 309 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 GLSO94925 669 aaPredicted RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 BGLAPP02818 100 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 CELA3AP09093 270 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 ACADSP16219 412 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 CDH2P19022 906 aaPredicted RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 CHMP24386 653 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 GDF1P27539 372 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 POU1F1P28069 291 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 SHC1P29353 583 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 RPS5P46782 204 aaKnown RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 CRISP1P54107 249 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 UCNP55089 124 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 FXYD6P3P58550 94 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 B3GALT5-AS1P59052 145 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 CXADRP78310 365 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 COX10Q12887 443 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 TOMM20Q15388 145 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 ZNF74Q16587 644 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 WIPI1Q5MNZ9 446 aaPredicted RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 WLSQ5T9L3 541 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 RAET1LQ5VY80 246 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 TMEM236Q5W0B7 351 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 ZNF620Q6ZNG0 422 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 RASSF6Q6ZTQ3 369 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 USP51Q70EK9 711 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 CHERPQ8IWX8 916 aaKnown RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 CDK20Q8IZL9 346 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 GTPBP8Q8N3Z3 284 aaPredicted RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 FAM83FQ8NEG4 500 aaPredicted RBP10.21□□□□□ -0.77
VMP1-207ENST00000588131 ZNF555Q8NEP9 628 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 ATP6V1C2Q8NEY4 427 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 STK35Q8TDR2 534 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 TAAR8Q969N4 342 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 CNBD2Q96M20 576 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 MOGAT1Q96PD6 335 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 HS3ST6Q96QI5 342 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 PLA2G12AQ9BZM1 189 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 OR2B2Q9GZK3 357 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 TMEM185BQ9H7F4 350 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 CHRNA9Q9UGM1 479 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 PCDHGB5Q9Y5G0 923 aa10.21□□□□□ -0.77
VMP1-207ENST00000588131 TRAV36DV7A0A075B6V5 113 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 TRAV27A0A087WT01 109 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 OR2M5A3KFT3 312 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 H3BML4 177 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 H3BN98 237 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 KLRC4-KLRK1H3BQV0 150 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 BCKDKO14874 412 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ZNF208O43345 1280 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 PTP4A3O75365 173 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 TRAPPC6AO75865 159 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 IGF2P01344 180 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 OPN1LWP04000 364 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 SAGP10523 405 aaPredicted RBP10.2□□□□□ -0.78
VMP1-207ENST00000588131 PEPDP12955 493 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ZNF17P17021 662 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ADH6P28332 368 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 EIF1P41567 113 aaKnown RBP10.2□□□□□ -0.78
VMP1-207ENST00000588131 MAGEA5P43359 124 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 ESRRGP62508 458 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 CACNA1BQ00975 2339 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 PMP22Q01453 160 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 PLGLB1Q02325 96 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 C19orf57Q0VDD7 668 aa10.2□□□□□ -0.78
VMP1-207ENST00000588131 SELENBP1Q13228 472 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms