RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 GATBO75879 557 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HIST1H1CP16403 213 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GBX2P52951 348 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GGTLC2Q14390 218 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NFATC4Q14934 902 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GSG1Q2KHT4 349 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ITPRIPL2Q3MIP1 535 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CDONQ4KMG0 1287 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RNASE12Q5GAN4 147 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ALG10BQ5I7T1 473 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 BAIAP2L2Q6UXY1 529 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LINC00114Q6XXX2 140 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF614Q8N883 585 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LSMEM1Q8N8F7 131 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR11H4Q8NGC9 324 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FAM3CQ92520 227 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 MED30Q96HR3 178 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CNN2Q99439 309 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SPOCK3Q9BQ16 436 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GSDMCQ9BYG8 508 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TRIM2Q9C040 744 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TMEM168Q9H0V1 697 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ELF5Q9UKW6 265 aaPredicted RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ICAM5Q9UMF0 924 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR6C74A6NCV1 312 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FAM25EA8MYX2 175 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 H0Y8X5 98 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CTDSPLO15194 276 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TSC22D2O75157 780 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CBX7O95931 251 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CD1AP06126 327 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 EMDP50402 254 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CCR6P51684 374 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CRYZQ08257 329 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GPM6BQ13491 265 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ESCO2Q56NI9 601 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TMEM196Q5HYL7 178 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FAM209AQ5JX71 171 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SLC22A10Q63ZE4 541 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RPL22L1Q6P5R6 122 aaKnown RBP13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TEX261Q6UWH6 196 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ESPNLQ6ZVH7 1005 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OVCH1Q7RTY7 1134 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CMIPQ8IY22 773 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SDR9C7Q8NEX9 313 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR51Q1Q8NH59 317 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 HGDQ93099 445 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 KXD1Q9BQD3 176 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CA5BQ9Y2D0 317 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 RNF215Q9Y6U7 377 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 U3KQ87 197 aa13.06□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TRABD2BA6NFA1 517 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GALR3O60755 368 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ANKRD34CP0C6C1 535 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GDI1P31150 447 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SNTB2Q13425 540 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DYRK1AQ13627 763 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 KLF9Q13886 244 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GPR18Q14330 331 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SLITRK4Q8IW52 837 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 FAM98AQ8NCA5 519 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SUN5Q8TC36 379 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SMIM4Q8WVI0 70 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ASB12Q8WXK4 309 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ANKRD9Q96BM1 317 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 WDR92Q96MX6 357 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR14A2Q96R54 314 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF275Q9NSD4 429 aaPredicted RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 UCKL1Q9NWZ5 548 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 AK6Q9Y3D8 172 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LEUTXA8MZ59 168 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NDUFB2O95178 105 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 H2AFB2P0C5Z0 115 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 UBL4AP11441 157 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TNFRSF4P43489 277 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PSG6Q00889 435 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZC3H14Q6PJT7 736 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 LUZP2Q86TE4 346 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CA13Q8N1Q1 262 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR52R1Q8NGF1 315 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 OR51L1Q8NGJ5 315 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 CMTM3Q96MX0 182 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 SMAD5Q99717 465 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ACTR6Q9GZN1 396 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NRIP3Q9NQ35 241 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 EVA1BQ9NVM1 165 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PCDHGA9Q9Y5G4 932 aaKnown RBP13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 DOCK8Q8NF50 2099 aa13.05□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TRBV2A0A0J9YWF9 115 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 A0A1W2PQ72 361 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 ANKRD61A6NGH8 418 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 GPR171O14626 319 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 TPOP07202 933 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 PVRP15151 417 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NTSR1P30989 418 aa13.04□□□□□ -0.32
CDK5RAP3-237ENST00000585163 NAA10P41227 235 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms