RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 FARSBQ9NSD9 589 aaKnown RBP2.09□□□□□ -2.07
VAPA-208ENST00000584796 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.09□□□□□ -2.07
VAPA-208ENST00000584796 ASF1BQ9NVP2 202 aa2.09□□□□□ -2.07
VAPA-208ENST00000584796 NLGN3Q9NZ94 848 aa2.09□□□□□ -2.07
VAPA-208ENST00000584796 FAM153AQ9UHL3 310 aa2.09□□□□□ -2.07
VAPA-208ENST00000584796 GGA2Q9UJY4 613 aa2.09□□□□□ -2.07
VAPA-208ENST00000584796 CDH9Q9ULB4 789 aa2.09□□□□□ -2.07
VAPA-208ENST00000584796 RNF150Q9ULK6 438 aa2.09□□□□□ -2.07
VAPA-208ENST00000584796 PLA2G4CQ9UP65 541 aa2.09□□□□□ -2.07
VAPA-208ENST00000584796 DNAJC13O75165 2243 aa2.09□□□□□ -2.08
VAPA-208ENST00000584796 SCN2AQ99250 2005 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.08□□□□□ -2.081e-7■■■□□ 14.9
VAPA-208ENST00000584796 DYSFO75923 2080 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 MACROD2A1Z1Q3 448 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CTAGE15A4D2H0 777 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 TRIM49BA6NDI0 452 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 NEMP2A6NFY4 417 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ZSCAN5CA6NGD5 496 aaPredicted RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 NPIPB9F8W1W9 429 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 NVLO15381 856 aaKnown RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 YKT6O15498 198 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 PHF1O43189 567 aaPredicted RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 AQP9O43315 295 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 B4GAT1O43505 415 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 RAD1O60671 282 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CYTIPO60759 359 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 TBL1XO60907 577 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 OR6A2O95222 327 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ADCY5O95622 1261 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 IL1BP01584 269 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 IGHV2-70P01814 119 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CSF2P04141 144 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 PCCBP05166 539 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 GP1BAP07359 652 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CSN3P07498 182 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 GOT1P17174 413 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 UGT1A6P19224 532 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 MPZP25189 248 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 PKLRP30613 574 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 MTIF2P46199 727 aaKnown RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 CNN1P51911 297 aaKnown RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 SMSP52788 366 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 MAPK12P53778 367 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 OR1D5P58170 312 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 GTF2BQ00403 316 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 SPIBQ01892 262 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 SLC34A1Q06495 639 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ABRQ12979 859 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 LCP2Q13094 533 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CUL2Q13617 745 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CUL3Q13618 768 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ZKSCAN8Q15776 578 aaPredicted RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 UGT3A2Q3SY77 523 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 FILIP1LQ4L180 1135 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CFAP157Q5JU67 520 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 NKAIN2Q5VXU1 208 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 RNLSQ5VYX0 342 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 Q6ZSR6 202 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 NCCRP1Q6ZVX7 275 aaPredicted RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 CTAGE6Q86UF2 777 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ANKRD46Q86W74 232 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 GPBP1Q86WP2 473 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 TRIM69Q86WT6 500 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 MEX3DQ86XN8 651 aaKnown RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 TMEM126BQ8IUX1 230 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ZBED8Q8IZ13 594 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 TMEM86AQ8N2M4 240 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 PARP8Q8N3A8 854 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ZCCHC7Q8N3Z6 543 aaKnown RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 ARL14Q8N4G2 192 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 LRRC52Q8N7C0 313 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 SLC37A3Q8NCC5 494 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 KIAA0895Q8NCT3 520 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 OR56B1Q8NGI3 324 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CCL4L1Q8NHW4 92 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 SLC2A14Q8TDB8 520 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 SLC26A7Q8TE54 656 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 DDI1Q8WTU0 396 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 RNF139Q8WU17 664 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 SELENOMQ8WWX9 145 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ART4Q93070 314 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 TSACCQ96A04 125 aaPredicted RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 EPSTI1Q96J88 318 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 DDX50Q9BQ39 737 aaKnown RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 C17orf62Q9BQA9 187 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ZNF559Q9BR84 538 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 TMEM121Q9BTD3 319 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ELOVL4Q9GZR5 314 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 NACA2Q9H009 215 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 UBQLN3Q9H347 655 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 SNX25Q9H3E2 840 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 LRRN3Q9H3W5 708 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CUEDC2Q9H467 287 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ASB7Q9H672 318 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 RMND5AQ9H871 391 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 GORASP2Q9H8Y8 452 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 LRRC40Q9H9A6 602 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 CSNK1G1Q9HCP0 422 aa2.08□□□□□ -2.08
VAPA-208ENST00000584796 ZCCHC3Q9NUD5 404 aaKnown RBP2.08□□□□□ -2.08
VAPA-208ENST00000584796 RBAKQ9NYW8 714 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms