RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 PSMB11A5LHX3 300 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 ZSCAN5BA6NJL1 495 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 CTAGE5O15320 804 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 SURF6O75683 361 aaKnown RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 SNAI1O95863 264 aaPredicted RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 MMP1P03956 469 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 SLC6A8P48029 635 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 APOC4P55056 127 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 DYNLL1P63167 89 aaKnown RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 KRT83P78385 493 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 LRRC31Q6UY01 552 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 ZFP2Q6ZN57 461 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 LEMD2Q8NC56 503 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 ACER1Q8TDN7 264 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 DTD2Q96FN9 168 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 ZNF560Q96MR9 790 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 COQ7Q99807 217 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 DESI2Q9BSY9 194 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 CRNKL1Q9BZJ0 848 aaKnown RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 CHMP4BQ9H444 224 aaKnown RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 RPAP3Q9H6T3 665 aaPredicted RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 ZDHHC11Q9H8X9 412 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 HOMER3Q9NSC5 361 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 COMMD8Q9NX08 183 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 ZNF282Q9UDV7 671 aaPredicted RBP2.24□□□□□ -2.05
COPS3-217ENST00000583160 ZNF225Q9UK10 706 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 TBX21Q9UL17 535 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 TET1Q8NFU7 2136 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 COL4A6Q14031 1691 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 CHD7Q9P2D1 2997 aa2.24□□□□□ -2.05
COPS3-217ENST00000583160 ZNF532Q9HCE3 1301 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 PTPRSQ13332 1948 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 TANC1Q9C0D5 1861 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 A0A0U1RRA0 63 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 A8MUA0 341 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 TMX2-CTNND1H3BSU7 103 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 DLGAP1O14490 977 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 HMMRO75330 724 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 IDH1O75874 414 aaKnown RBP2.23□□□□□ -2.05
COPS3-217ENST00000583160 INSP01308 110 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 RCC1P18754 421 aaPredicted RBP2.23□□□□□ -2.05
COPS3-217ENST00000583160 ATP5DP30049 168 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 CASP3P42574 277 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 HNRNPFP52597 415 aaKnown RBP2.23□□□□□ -2.05
COPS3-217ENST00000583160 UNC119Q13432 240 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 MORF4L2Q15014 288 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 ALX1Q15699 326 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 SYPL1Q16563 259 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 HFEQ30201 348 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 TOR1AIP1Q5JTV8 583 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 IYDQ6PHW0 289 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 FAM43BQ6ZT52 329 aaPredicted RBP2.23□□□□□ -2.05
COPS3-217ENST00000583160 Q7L0L9 218 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 FAM220AQ7Z4H9 259 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 LINC01551Q86U37 167 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 LCA5Q86VQ0 697 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 SKA3Q8IX90 412 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 SFRP1Q8N474 314 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 FAM71E2Q8N5Q1 922 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 FAM133AQ8N9E0 248 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 GMCL1P1Q8NEA9 526 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 NEK11Q8NG66 645 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 PSMA8Q8TAA3 256 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 TRUB1Q8WWH5 349 aaKnown RBP2.23□□□□□ -2.05
COPS3-217ENST00000583160 PTP4A1Q93096 173 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 ADIPOR1Q96A54 375 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 CDX2Q99626 313 aaPredicted RBP2.23□□□□□ -2.05
COPS3-217ENST00000583160 SLC38A10Q9HBR0 1119 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 SH2D2AQ9NP31 389 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 DDX19BQ9UMR2 479 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 GMPPBQ9Y5P6 360 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 XIRP2A4UGR9 3374 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 PCM1Q15154 2024 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 REV3LO60673 3130 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 TRANK1O15050 2925 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 BRWD1Q9NSI6 2320 aa2.23□□□□□ -2.05
COPS3-217ENST00000583160 PRRC2BQ5JSZ5 2229 aaKnown RBP2.22□□□□□ -2.05
COPS3-217ENST00000583160 TTC41PQ6P2S7 1318 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 SYNRGQ9UMZ2 1314 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 CHD9Q3L8U1 2897 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 SIP14410 1827 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 IGLV4-69A0A075B6H9 119 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 IGLV4-60A0A075B6I1 120 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 F5H6K3 240 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 H0YL77 283 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 K7N7A8 449 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 CASKO14936 926 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 ALOX15BO15296 676 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 FMO6PO60774 539 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 HSF2BPO75031 334 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 TRIM3O75382 744 aaPredicted RBP2.22□□□□□ -2.05
COPS3-217ENST00000583160 FLOT1O75955 427 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 ZNF823P16415 610 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 AQP1P29972 269 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 LHX2P50458 406 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 ACLYP53396 1101 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 RPL8P62917 257 aaKnown RBP2.22□□□□□ -2.05
COPS3-217ENST00000583160 KLRC3Q07444 240 aa2.22□□□□□ -2.05
COPS3-217ENST00000583160 CDKN3Q16667 212 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms