RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 EFNA3P52797 238 aa20.72■□□□□ 0.91
CCDC47-204ENST00000582252 PRPS1P60891 318 aa20.72■□□□□ 0.91
CCDC47-204ENST00000582252 RPS7P62081 194 aaKnown RBP20.72■□□□□ 0.91
CCDC47-204ENST00000582252 DCDP81605 110 aaKnown RBP20.72■□□□□ 0.91
CCDC47-204ENST00000582252 ITGADQ13349 1161 aa20.72■□□□□ 0.91
CCDC47-204ENST00000582252 NKAIN1Q4KMZ8 207 aa20.72■□□□□ 0.91
CCDC47-204ENST00000582252 KLHL12Q53G59 568 aa20.72■□□□□ 0.91
CCDC47-204ENST00000582252 BPHLQ86WA6 291 aaPredicted RBP20.72■□□□□ 0.91
CCDC47-204ENST00000582252 ZNF563Q8TA94 476 aa20.72■□□□□ 0.91
CCDC47-204ENST00000582252 NDEL1Q9GZM8 345 aa20.72■□□□□ 0.91
CCDC47-204ENST00000582252 EIF4E2O60573 245 aaKnown RBP20.71■□□□□ 0.91
CCDC47-204ENST00000582252 CBFA2T3O75081 653 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 GABRA5P31644 462 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 BDH1Q02338 343 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 TRA2AQ13595 282 aaKnown RBP eCLIP20.71■□□□□ 0.913e-9■□□□□ 10.9
CCDC47-204ENST00000582252 RGS21Q2M5E4 152 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 DPY19L2P2Q6ZN68 376 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 ATG4DQ86TL0 474 aaPredicted RBP20.71■□□□□ 0.91
CCDC47-204ENST00000582252 PRR22Q8IZ63 422 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 METTL21AQ8WXB1 218 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 OMA1Q96E52 524 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 ERMAPQ96PL5 475 aaPredicted RBP20.71■□□□□ 0.91
CCDC47-204ENST00000582252 COQ7Q99807 217 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 NUAK2Q9H093 628 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 GSTK1Q9Y2Q3 226 aa20.71■□□□□ 0.91
CCDC47-204ENST00000582252 J3QRE1 110 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 PRKNO60260 465 aaPredicted RBP20.7■□□□□ 0.9
CCDC47-204ENST00000582252 TGM1P22735 817 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 CAPZA2P47755 286 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 NRG3P56975 720 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 SIRT6Q8N6T7 355 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF441Q8N8Z8 693 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF485Q8NCK3 441 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 TP53INP1Q96A56 240 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 TBL1XR1Q9BZK7 514 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 MED20Q9H944 212 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 SLC22A11Q9NSA0 550 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 HAO2Q9NYQ3 351 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 FAM186AA6NE01 2351 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 FER1L5A0AVI2 2057 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 ZFHX2Q9C0A1 2572 aaPredicted RBP20.7■□□□□ 0.9
CCDC47-204ENST00000582252 A0A075B6Q4 140 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 ALG1L2C9J202 215 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 IDH3BO43837 385 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 RPL4P36578 427 aaKnown RBP20.7■□□□□ 0.9
CCDC47-204ENST00000582252 RORCP51449 518 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 PPP5CP53041 499 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF45Q02386 682 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 FHL1Q13642 323 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 CRMP1Q14194 572 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 LCN1P1Q5VSP4 162 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 LANCL3Q6ZV70 420 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 NUP54Q7Z3B4 507 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 PPP1R3BQ86XI6 285 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 TM9SF4Q92544 642 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 TEAD3Q99594 435 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 CHRNA9Q9UGM1 479 aa20.7■□□□□ 0.9
CCDC47-204ENST00000582252 COL27A1Q8IZC6 1860 aaPredicted RBP20.69■□□□□ 0.9
CCDC47-204ENST00000582252 HEATR5AQ86XA9 2040 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 PNMA8CA0A1B0GUJ8 204 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 C12orf71A8MTZ7 269 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 WWP2O00308 870 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 NDUFB5O43674 189 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 ONECUT2O95948 504 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 IL1AP01583 271 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 SLC16A1P53985 500 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 ACTC1P68032 377 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 ACTA1P68133 377 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 RUNX1T1Q06455 604 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 ISXQ2M1V0 245 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 PHF19Q5T6S3 580 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 ZNF322Q6U7Q0 402 aaPredicted RBP20.69■□□□□ 0.9
CCDC47-204ENST00000582252 APOOLQ6UXV4 268 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 Q6ZNX1 250 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 FAM98AQ8NCA5 519 aaKnown RBP20.69■□□□□ 0.9
CCDC47-204ENST00000582252 OR5M3Q8NGP4 307 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 SPRYD4Q8WW59 207 aaPredicted RBP20.69■□□□□ 0.9
CCDC47-204ENST00000582252 LIPHQ8WWY8 451 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 PTP4A1Q93096 173 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 PHOX2BQ99453 314 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 NRSN2Q9GZP1 204 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 OR51V1Q9H2C8 321 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 TXNL4BQ9NX01 149 aaKnown RBP20.69■□□□□ 0.9
CCDC47-204ENST00000582252 SLC6A5Q9Y345 797 aa20.69■□□□□ 0.9
CCDC47-204ENST00000582252 KIF26BQ2KJY2 2108 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 DAPL1A0PJW8 107 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 CCDC182A6NF36 153 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 SAGE2PA6NJ88 616 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 IDSB3KWA1 339 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 ALOX12BO75342 701 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 PGCP20142 388 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 SLC2A5P22732 501 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 ABCD3P28288 659 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 LGALS3BPQ08380 585 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 FAAH2Q6GMR7 532 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 PWWP2BQ6NUJ5 590 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 OVCH1Q7RTY7 1134 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 ANKRD37Q7Z713 158 aa20.68■□□□□ 0.9
CCDC47-204ENST00000582252 KISS1RQ969F8 398 aaPredicted RBP20.68■□□□□ 0.9
CCDC47-204ENST00000582252 C1GALT1C1Q96EU7 318 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms