RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 CGREF1Q99674 301 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 TACO1Q9BSH4 297 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 KLHL4Q9C0H6 718 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 LIME1Q9H400 295 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 CACYBPQ9HB71 228 aaKnown RBP9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 KLHL28Q9NXS3 571 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 TMEM181Q9P2C4 612 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 TRAPPC4Q9Y296 219 aa9.13□□□□□ -0.95
PPP4R1-220ENST00000581835 DSCAMO60469 2012 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ZC3H12DA2A288 527 aaKnown RBP9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF724A8MTY0 619 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 FBP2O00757 339 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 FRS3O43559 492 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 DNPH1O43598 174 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 HRGP04196 525 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 IMPDH2P12268 514 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 SLC6A2P23975 617 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 PRKAR1BP31321 381 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 DNAJA1P31689 397 aaKnown RBP9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 MDH1P40925 334 aaKnown RBP9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 MTPNP58546 118 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 H3F3AP84243 136 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 HOXC5Q00444 222 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 NFYCQ13952 458 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 SCARB2Q14108 478 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 SELPLGQ14242 412 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 PDK3Q15120 406 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 FBXW10Q5XX13 1052 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ANKRD34AQ69YU3 496 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 PTOV1Q86YD1 416 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 GABRG1Q8N1C3 465 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 CADM2Q8N3J6 435 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF775Q96BV0 537 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ZHX1-C8orf76Q96EF9 292 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF317Q96PQ6 595 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF300Q96RE9 604 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 MED18Q9BUE0 208 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 POTEKPQ9BYX7 375 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 FANCFQ9NPI8 374 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 SAR1AQ9NR31 198 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 MRGBPQ9NV56 204 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF226Q9NYT6 803 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 KLHL14Q9P2G3 628 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 ITGB1BP2Q9UKP3 347 aa9.12□□□□□ -0.95
PPP4R1-220ENST00000581835 IGKV3D-15A0A087WSY6 115 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF716A6NP11 495 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 DEFB108AA8MXU0 73 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 ZNF814B7Z6K7 855 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 SIAH2O43255 324 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 TPST1O60507 370 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 RAMP1O60894 148 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 GCM2O75603 506 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 PSMB1P20618 241 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 CRYGSP22914 178 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 CXCR1P25024 350 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 AQP1P29972 269 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 OR3A2P47893 321 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 PCBP3P57721 371 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 OR2B6P58173 313 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 SLC35A1P78382 337 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 BNIP2Q12982 314 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 KLF10Q13118 480 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 POU4F3Q15319 338 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 GLIPR1L2Q4G1C9 344 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 DHRS4L2Q6PKH6 230 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 ATG4DQ86TL0 474 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 COMTD1Q86VU5 262 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 KRT73Q86Y46 540 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 CCDC103Q8IW40 242 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 C11orf65Q8NCR3 313 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 HIPK4Q8NE63 616 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 C3orf49Q96BT1 292 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 ZC3HAV1LQ96H79 300 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 SPATA5L1Q9BVQ7 753 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 OR10A4Q9H209 315 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 KAT8Q9H7Z6 458 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 PLEKHF2Q9H8W4 249 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 C6orf203Q9P0P8 240 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 GPR52Q9Y2T5 361 aa9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 HEATR1Q9H583 2144 aaKnown RBP9.11□□□□□ -0.95
PPP4R1-220ENST00000581835 PLCE1Q9P212 2302 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 LOC100653049A0A140TA62 436 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 A0A1W2PPR1 153 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 PRORSD1PA6NEY8 169 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 A8MVM7 634 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 TMEM229AB2RXF0 380 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 EIF1BO60739 113 aaKnown RBP9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 NPIPB7O75200 414 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 SERPINB7O75635 380 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 KRT34O76011 436 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 MFN2O95140 757 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 THBDP07204 575 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 PPP3CBP16298 524 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 FPR1P21462 350 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 EDNRAP25101 427 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 ADSLP30566 484 aaPredicted RBP9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 NTF4P34130 210 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 IDUAP35475 653 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 GZMMP51124 257 aa9.1□□□□□ -0.95
PPP4R1-220ENST00000581835 SLC16A1P53985 500 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms