RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PDK3Q15120 406 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 GCNT6Q5T4J0 391 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 ABLIM2Q6H8Q1 611 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 WBP2NLQ6ICG8 309 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 CADM2Q8N3J6 435 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 STEAP2Q8NFT2 490 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 MBD6Q96DN6 1003 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.31■□□□□ 0.36
SREBF1-220ENST00000581707 CHST2Q9Y4C5 530 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 MED13LQ71F56 2210 aa17.31■□□□□ 0.36
SREBF1-220ENST00000581707 IGKV3D-15A0A087WSY6 115 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 EVPLLA8MZ36 301 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF814B7Z6K7 855 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 ATE1O95260 518 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 ADAP00813 363 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 ARAFP10398 606 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 PRG2P13727 222 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 ETS2P15036 469 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 CXCR1P25024 350 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 P2RY6Q15077 328 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 SFRP5Q5T4F7 317 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 DLEU7Q6UYE1 221 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 GALNT5Q7Z7M9 940 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 C10orf111Q8N326 155 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 NFKBIDQ8NI38 313 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 PIGXQ8TBF5 258 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 CXXC4Q9H2H0 198 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF385DQ9H6B1 395 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 EMC3Q9P0I2 261 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 LEF1Q9UJU2 399 aaPredicted RBP17.3■□□□□ 0.36
SREBF1-220ENST00000581707 CORO2BQ9UQ03 480 aa17.3■□□□□ 0.36
SREBF1-220ENST00000581707 ROS1P08922 2347 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 ZC3H12DA2A288 527 aaKnown RBP17.29■□□□□ 0.36
SREBF1-220ENST00000581707 KLF4O43474 513 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 IMPDH2P12268 514 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 GPX2P18283 190 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 IL32P24001 234 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 SLC35A1P78382 337 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 CDK6Q00534 326 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 TSC22D1Q15714 1073 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 METTL21CQ5VZV1 264 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 REEP3Q6NUK4 255 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 Q6ZT83 130 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 SERPINA11Q86U17 422 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 WFDC8Q8IUA0 241 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 CCDC103Q8IW40 242 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF100Q8IYN0 542 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 S100PBPQ96BU1 408 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 POTEKPQ9BYX7 375 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 IKZF5Q9H5V7 419 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 PRSS50Q9UI38 385 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 NDUFAF1Q9Y375 327 aa17.29■□□□□ 0.36
SREBF1-220ENST00000581707 ZNF716A6NP11 495 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 GPR171O14626 319 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 ANGPT2O15123 496 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 EIF1BO60739 113 aaKnown RBP17.28■□□□□ 0.36
SREBF1-220ENST00000581707 FPR1P21462 350 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 H3F3AP84243 136 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 ITGADQ13349 1161 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 RUNDC3AQ59EK9 446 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 BEX5Q5H9J7 111 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 LSRQ86X29 649 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-220ENST00000581707 KRT73Q86Y46 540 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 TSPEARQ8WU66 669 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 KISS1RQ969F8 398 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-220ENST00000581707 SLC35B4Q969S0 331 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 HS3ST6Q96QI5 342 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 ALPK1Q96QP1 1244 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 CPPED1Q9BRF8 314 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-220ENST00000581707 NAA11Q9BSU3 229 aaPredicted RBP17.28■□□□□ 0.36
SREBF1-220ENST00000581707 TMEM38AQ9H6F2 299 aa17.28■□□□□ 0.36
SREBF1-220ENST00000581707 NOSIPQ9Y314 301 aaKnown RBP17.28■□□□□ 0.36
SREBF1-220ENST00000581707 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-220ENST00000581707 FRS3O43559 492 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 RAMP1O60894 148 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 TROVE2P10155 538 aaKnown RBP eCLIP17.27■□□□□ 0.36
SREBF1-220ENST00000581707 SLC6A2P23975 617 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 EDNRAP25101 427 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 LOXP28300 417 aaPredicted RBP17.27■□□□□ 0.36
SREBF1-220ENST00000581707 PRKAR1BP31321 381 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 IDUAP35475 653 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 SLC16A1P53985 500 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 BNIP2Q12982 314 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 DEFB113Q30KQ7 82 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.27■□□□□ 0.36
SREBF1-220ENST00000581707 DHDDSQ86SQ9 333 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 DPP10Q8N608 796 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 USB1Q9BQ65 265 aaKnown RBP17.27■□□□□ 0.36
SREBF1-220ENST00000581707 SPATA5L1Q9BVQ7 753 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 TMEM120AQ9BXJ8 343 aa17.27■□□□□ 0.36
SREBF1-220ENST00000581707 CNOT4O95628 575 aaKnown RBP17.26■□□□□ 0.35
SREBF1-220ENST00000581707 CD53P19397 219 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 NR1H2P55055 460 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 HOXC5Q00444 222 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 CEACAM7Q14002 265 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 SCARB2Q14108 478 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 ADRM1Q16186 407 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 ALKBH2Q6NS38 261 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 PAQR6Q6TCH4 344 aa17.26■□□□□ 0.35
SREBF1-220ENST00000581707 BHLHA15Q7RTS1 189 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms