RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 IGHG4P01861 327 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 COX5AP20674 150 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 GNA11P29992 359 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 HTR1FP30939 366 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 RPL13AP40429 203 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 GRIA1P42261 906 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 HLCSP50747 726 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 EFNB2P52799 333 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 AIF1P55008 147 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 CSNK1G2P78368 415 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 HERPUD1Q15011 391 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 SLC15A2Q16348 729 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 DPYSL2Q16555 572 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 DMRTC1Q5HYR2 192 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 EOGTQ5NDL2 527 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 CENPPQ6IPU0 288 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 ERI1Q8IV48 349 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 HTR3CQ8WXA8 447 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 OR1E3Q8WZA6 343 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 COQ2Q96H96 371 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 SECISBP2Q96T21 854 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 EBF4Q9BQW3 602 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 CAPS2Q9BXY5 557 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 PDFQ9HBH1 243 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 CDH9Q9ULB4 789 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 UGT2A1Q9Y4X1 527 aa3.28□□□□□ -1.88
SMCHD1-205ENST00000581383 TDRD6O60522 2096 aaKnown RBP3.28□□□□□ -1.89
SMCHD1-205ENST00000581383 RPAP1Q9BWH6 1393 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 THSD7BQ9C0I4 1608 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 A0A0J9YXY3 114 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 CLRN2A0PK11 232 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 HELTA6NFD8 242 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 IDSB3KWA1 339 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 HIP1O00291 1037 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 DCTN6O00399 190 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 ATP5LO75964 103 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 AP2A1O95782 977 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 ACTL6AO96019 429 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 IL1BP01584 269 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 ATP6V1B2P21281 511 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 GABRR1P24046 479 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 CALCRP30988 508 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 UGT1A5P35504 534 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 PTGDSP41222 190 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 MAP3K8P41279 467 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 PKNOX1P55347 436 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 GRB7Q14451 532 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 SFT2D3Q587I9 215 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 GPRC6AQ5T6X5 926 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 Q6ZPB1 254 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 ZNF679Q8IYX0 411 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 ZCCHC7Q8N3Z6 543 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 EIF1ADQ8N9N8 165 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 OR5D13Q8NGL4 314 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 DCUN1D4Q92564 292 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 FGF11Q92914 225 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 RPRD1AQ96P16 312 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 SLC38A2Q96QD8 506 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 ARHGDIGQ99819 225 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 GON7Q9BXV9 100 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 NT5C3AQ9H0P0 336 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 NARFLQ9H6Q4 476 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 ZDHHC11Q9H8X9 412 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 BTNL2Q9UIR0 455 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 STAP1Q9ULZ2 295 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 COPS3Q9UNS2 423 aa3.27□□□□□ -1.89
SMCHD1-205ENST00000581383 IGKV1D-8A0A087WSZ0 117 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 EMC8O43402 210 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 SNAPINO95295 136 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 STAMBPO95630 424 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 LGI1O95970 557 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 OPN1MWP04001 364 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 DUX4L4P0CJ87 422 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 OPN1MW2P0DN77 364 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 OPN1MW3P0DN78 364 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 POU2F1P14859 743 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 FUT3P21217 361 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 MAGEA8P43361 318 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 CCT3P49368 545 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 CAV2P51636 162 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 APOC4P55056 127 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 NCBP1Q09161 790 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 ORC2Q13416 577 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 RIPK1Q13546 671 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 KLF17Q5JT82 389 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 PDZK1Q5T2W1 519 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 OTPQ5XKR4 325 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 FTMTQ8N4E7 242 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 MFSD9Q8NBP5 474 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 ZNF740Q8NDX6 193 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 OR4K14Q8NGD5 310 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 FRAT1Q92837 279 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 UBE2E3Q969T4 207 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 SLC41A3Q96GZ6 507 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 TIMD4Q96H15 378 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 SEC22AQ96IW7 307 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 RNF2Q99496 336 aa3.26□□□□□ -1.89
SMCHD1-205ENST00000581383 RAB34Q9BZG1 259 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms