RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 TRPV3Q8NET8 790 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 ACER1Q8TDN7 264 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 SENP8Q96LD8 212 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 C12orf42Q96LP6 360 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 DEFB118Q96PH6 123 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 NPY6RQ99463 290 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 TMEM43Q9BTV4 400 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 FICDQ9BVA6 458 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 UPF3BQ9BZI7 483 aaKnown RBP3.47□□□□□ -1.85
NF1-220ENST00000581113 ROPN1BQ9BZX4 212 aaPredicted RBP3.47□□□□□ -1.85
NF1-220ENST00000581113 BOLA2Q9H3K6 86 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 PTTG3PQ9NZH4 202 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 RHBDD3Q9Y3P4 386 aa3.47□□□□□ -1.85
NF1-220ENST00000581113 MAST2Q6P0Q8 1798 aa3.46□□□□□ -1.85
NF1-220ENST00000581113 RBBP6Q7Z6E9 1792 aaKnown RBP3.46□□□□□ -1.85
NF1-220ENST00000581113 PHIPQ8WWQ0 1821 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 IGHV3-16A0A0C4DH30 117 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 A0A0U1RQS6 177 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 ATP6AP2A0A1C7CYW4 349 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 HEATR9A2RTY3 570 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 ANKRD30BLA7E2S9 258 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 IQCF5A8MTL0 148 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 TCP11X1B4DZS4 312 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 E7ENQ6 273 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 WWP2O00308 870 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SDHDO14521 159 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 PRKAB2O43741 272 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SH3BGRLO75368 114 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SRSF10O75494 262 aaKnown RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 CNMDO75829 334 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 NEBLO76041 1014 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 OR6A2O95222 327 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 GAS8O95995 478 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 PRPS2P11908 318 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 MARCKSP29966 332 aaPredicted RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 SPRP35270 261 aaPredicted RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 CHI3L1P36222 383 aaPredicted RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 CSRP3P50461 194 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 BDH1Q02338 343 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 GABPAQ06546 454 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SELPLGQ14242 412 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 STK38Q15208 465 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 TRIP10Q15642 601 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 CAMK4Q16566 473 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 PCK2Q16822 640 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 TPD52L1Q16890 204 aaPredicted RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 C15orf32Q32M92 178 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 HNRNPA1L2Q32P51 320 aaKnown RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 EIPR1Q53HC9 387 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SPANXN2Q5MJ10 180 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SLC25A30Q5SVS4 291 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 TTC23Q5W5X9 447 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 BLOC1S2Q6QNY1 142 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 BZW1Q7L1Q6 419 aaKnown RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 NUFIP2Q7Z417 695 aaKnown RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 GPR142Q7Z601 462 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 CEACAM19Q7Z692 300 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 GCNT2Q8N0V5 402 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 GPR137CQ8N3F9 429 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 CSNK1G2-AS1Q8NCQ2 148 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 OR5D13Q8NGL4 314 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 FAM81AQ8TBF8 368 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 PNPT1Q8TCS8 783 aaKnown RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 SDR42E1Q8WUS8 393 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 TSEN15Q8WW01 171 aaKnown RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 MAIP1Q8WWC4 291 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 PCED1BQ96HM7 432 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 CYTH2Q99418 400 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 MRPL13Q9BYD1 178 aaKnown RBP3.46□□□□□ -1.86
NF1-220ENST00000581113 TSPYL1Q9H0U9 437 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 PORCNQ9H237 461 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 BLZF1Q9H2G9 400 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 AZI2Q9H6S1 392 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 MARCH7Q9H992 704 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 MEAF6Q9HAF1 191 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 GPR83Q9NYM4 423 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 HMGXB4Q9UGU5 601 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 GGA2Q9UJY4 613 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SLC22A14Q9Y267 594 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 CBY1Q9Y3M2 126 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 ATP6V1DQ9Y5K8 247 aa3.46□□□□□ -1.86
NF1-220ENST00000581113 SIPA1L1O43166 1804 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 LOC285556D6RIA3 1793 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 UMODL1Q5DID0 1318 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 NOTCH3Q9UM47 2321 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 TEX48A0A1B0GUV7 120 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 METTL21EPA6NDL7 271 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 LRRIQ3A6PVS8 624 aaPredicted RBP3.45□□□□□ -1.86
NF1-220ENST00000581113 ZNF724A8MTY0 619 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 FCMRO60667 390 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 TRIM3O75382 744 aaPredicted RBP3.45□□□□□ -1.86
NF1-220ENST00000581113 WBP4O75554 376 aaKnown RBP3.45□□□□□ -1.86
NF1-220ENST00000581113 STBD1O95210 358 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 RENP00797 406 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 IGHG1P01857 330 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 MELTFP08582 738 aa3.45□□□□□ -1.86
NF1-220ENST00000581113 RPSAP08865 295 aaKnown RBP3.45□□□□□ -1.86
NF1-220ENST00000581113 RRASP10301 218 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms