RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CA7P43166 264 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 LIMS1P48059 325 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 LHX2P50458 406 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 TAS2R41P59536 307 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 RAC1P63000 192 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 MERTKQ12866 999 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 SELENBP1Q13228 472 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 SF3B4Q15427 424 aaKnown RBP eCLIP13.99□□□□□ -0.17
SS18-216ENST00000580751 NPTX1Q15818 432 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 GXYLT1Q4G148 440 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 DCST1Q5T197 706 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 WBP2NLQ6ICG8 309 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 PPP4R4Q6NUP7 873 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 DEF8Q6ZN54 512 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 ZBTB49Q6ZSB9 765 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 PLEKHM3Q6ZWE6 761 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 MEIOBQ8N635 442 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 OR5M9Q8NGP3 310 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 PRR7Q8TB68 274 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 DNAJC9Q8WXX5 260 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 GABARAPL1Q9H0R8 117 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 SEMA6AQ9H2E6 1030 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 NMNAT1Q9HAN9 279 aaPredicted RBP13.99□□□□□ -0.17
SS18-216ENST00000580751 C12orf10Q9HB07 376 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 SERINC1Q9NRX5 453 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 PNPLA3Q9NST1 481 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 CAMK2AQ9UQM7 478 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 LYVE1Q9Y5Y7 322 aa13.99□□□□□ -0.17
SS18-216ENST00000580751 SPIN1Q9Y657 262 aaPredicted RBP13.99□□□□□ -0.17
SS18-216ENST00000580751 A0A1B0GUH1 482 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 TRAPPC13A5PLN9 417 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 FFAR1O14842 300 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 WISP1O95388 367 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 HOXD4P09016 255 aaPredicted RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 PRG2P13727 222 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 ZNF23P17027 643 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 APOBEC1P41238 236 aaKnown RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 STARP49675 285 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 POLR2HP52434 150 aaKnown RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 CLDN18P56856 261 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 SPIBQ01892 262 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 TRAM2Q15035 370 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 C3AR1Q16581 482 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 EIF2S3LQ2VIR3 472 aaKnown RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 EMC4Q5J8M3 183 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 ENTPD8Q5MY95 495 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 C3orf33Q6P1S2 294 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 DOLPP1Q86YN1 238 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 RBM45Q8IUH3 476 aaKnown RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 LACC1Q8IV20 430 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 CADM2Q8N3J6 435 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 OR4C15Q8NGM1 316 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 SLC25A43Q8WUT9 341 aaPredicted RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 DNAJA4Q8WW22 397 aaPredicted RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 SMPDL3BQ92485 455 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 ZNF524Q96C55 264 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 WDYHV1Q96HA8 205 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 MPP4Q96JB8 637 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 RDH12Q96NR8 316 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 NPAS1Q99742 590 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 RBM4BQ9BQ04 359 aaKnown RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 RBM4Q9BWF3 364 aaKnown RBP13.98□□□□□ -0.17
SS18-216ENST00000580751 USE1Q9NZ43 259 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 TINAGQ9UJW2 476 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 TMCC3Q9ULS5 477 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 OAZ3Q9UMX2 235 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 RELNP78509 3460 aa13.98□□□□□ -0.17
SS18-216ENST00000580751 AHRRA9YTQ3 701 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 SEC14L5O43304 696 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 TPST2O60704 377 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 SEMA7AO75326 666 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 FKBP2P26885 142 aaKnown RBP13.97□□□□□ -0.17
SS18-216ENST00000580751 ACVR2AP27037 513 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 PEX2P28328 305 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 IFNGR2P38484 337 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 MAP2K6P52564 334 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 CDH12P55289 794 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 HOXC5Q00444 222 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 PIN1Q13526 163 aaPredicted RBP13.97□□□□□ -0.17
SS18-216ENST00000580751 MICAQ29983 383 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 C1QL3Q5VWW1 255 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 ZNF585AQ6P3V2 769 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 ULK3Q6PHR2 472 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 UBQLNLQ8IYU4 475 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 RNF113BQ8IZP6 322 aaKnown RBP13.97□□□□□ -0.17
SS18-216ENST00000580751 ICA1LQ8NDH6 482 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 ADAMTS16Q8TE57 1224 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 NRG4Q8WWG1 115 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 SLC38A4Q969I6 547 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 HS6ST2Q96MM7 605 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 ALKBH4Q9NXW9 302 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 SELENONQ9NZV5 590 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 RPS6KB2Q9UBS0 482 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 CHRNA9Q9UGM1 479 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 SH3BGRL2Q9UJC5 107 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 TESMINQ9Y4I5 508 aa13.97□□□□□ -0.17
SS18-216ENST00000580751 USP9XQ93008 2570 aaPredicted RBP13.97□□□□□ -0.17
SS18-216ENST00000580751 PYCARD-AS1I3L0S3 204 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 CHP2O43745 196 aa13.96□□□□□ -0.17
SS18-216ENST00000580751 PNMTP11086 282 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms