RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 RFXANKO14593 260 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 ABCD4O14678 606 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 HDAC3O15379 428 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 RAD51DO75771 328 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 SOD3P08294 240 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 IDO1P14902 403 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 CXCR1P25024 350 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 SLC1A3P43003 542 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 SLC16A1P53985 500 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 UFM1P61960 85 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 PHC1P78364 1004 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 BST1Q10588 318 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 KLHL24Q6TFL4 600 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 CASP12Q6UXS9 341 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 OLIG3Q7RTU3 272 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 ADGRG3Q86Y34 549 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
GGA3-208ENST00000579743 ARL5BQ96KC2 179 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 RHNO1Q9BSD3 238 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 C20orf27Q9GZN8 174 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 PNPOQ9NVS9 261 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 P2RX2Q9UBL9 471 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 TMED7Q9Y3B3 224 aa12.11□□□□□ -0.47
GGA3-208ENST00000579743 NIPBLQ6KC79 2804 aaeCLIP12.1□□□□□ -0.47
GGA3-208ENST00000579743 USF3Q68DE3 2245 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 INAFM1C9JVW0 142 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 KRT33AO76009 404 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 GPIP06744 558 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 PAX7P23759 505 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 TACR3P29371 465 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 CDKN1AP38936 164 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 DSCR9P59020 149 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 DMTNQ08495 405 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 LARS2Q15031 903 aaKnown RBP12.1□□□□□ -0.47
GGA3-208ENST00000579743 SYPL1Q16563 259 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.1□□□□□ -0.47
GGA3-208ENST00000579743 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 ANKFN1Q8N957 763 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 OR52N5Q8NH56 324 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 CNOT9Q92600 299 aaKnown RBP12.1□□□□□ -0.47
GGA3-208ENST00000579743 ZNF524Q96C55 264 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 TRAF4Q9BUZ4 470 aaPredicted RBP12.1□□□□□ -0.47
GGA3-208ENST00000579743 TAPBPLQ9BX59 468 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 REG4Q9BYZ8 158 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 OR11A1Q9GZK7 315 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 SLCO5A1Q9H2Y9 848 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 MALT1Q9UDY8 824 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 AMDHD2Q9Y303 409 aa12.1□□□□□ -0.47
GGA3-208ENST00000579743 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 GOLGA8QA0A0J9YX86 632 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 GOLGA8OA6NCC3 632 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 ZNF716A6NP11 495 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 RNF223E7ERA6 249 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 GOLGA8NF8WBI6 632 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 RAMP1O60894 148 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 SLC22A3O75751 556 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 WNT11O96014 354 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 NCF2P19878 526 aaPredicted RBP12.09□□□□□ -0.47
GGA3-208ENST00000579743 EPHA3P29320 983 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 CRATP43155 626 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 ZNF83P51522 516 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 CRISP3P54108 245 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 CHRNB3Q05901 458 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 FUT5Q11128 374 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 RAB35Q15286 201 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 PGGHGQ32M88 737 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 MRPL2Q5T653 305 aaKnown RBP12.09□□□□□ -0.47
GGA3-208ENST00000579743 TMEM225Q6GV28 225 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 PAQR6Q6TCH4 344 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 HMGN2P46Q86SG4 172 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 DTX2Q86UW9 622 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 POMGNT2Q8NAT1 580 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 C1orf162Q8NEQ5 155 aaPredicted RBP12.09□□□□□ -0.47
GGA3-208ENST00000579743 NEUROG1Q92886 237 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 ZG16BQ96DA0 208 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 ITCHQ96J02 903 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 DHRS9Q9BPW9 319 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 SLC38A1Q9H2H9 487 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 RAD21L1Q9H4I0 556 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 PIF1Q9H611 641 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 OSGIN1Q9UJX0 560 aa12.09□□□□□ -0.47
GGA3-208ENST00000579743 A0A096LPI6 279 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 TMEM120BA0PK00 339 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 OR6C65A6NJZ3 312 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 CLDN24A6NM45 220 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 SHISA9B4DS77 424 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 M0R1B8 84 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 SDHDO14521 159 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 TLX2O43763 284 aaPredicted RBP12.08□□□□□ -0.48
GGA3-208ENST00000579743 ERLIN1O75477 346 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 VAMP5O95183 116 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 IFNA2P01563 188 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 GSNP06396 782 aa12.08□□□□□ -0.48
GGA3-208ENST00000579743 CHRM4P08173 479 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms