RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 EXD2Q9NVH0 621 aa9.34□□□□□ -0.91
CSNK1D-210ENST00000579308 NOP53Q9NZM5 478 aaKnown RBP9.34□□□□□ -0.91
CSNK1D-210ENST00000579308 LGALS13Q9UHV8 139 aa9.34□□□□□ -0.91
CSNK1D-210ENST00000579308 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.91
CSNK1D-210ENST00000579308 SPIN1Q9Y657 262 aaPredicted RBP9.34□□□□□ -0.91
CSNK1D-210ENST00000579308 NUP214P35658 2090 aaPredicted RBP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 PRSS51A0A1B0GVH4 220 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 CLDN24A6NM45 220 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 M0R1B8 84 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 F12P00748 615 aaPredicted RBP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 C1QCP02747 245 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 NUDT17P0C025 328 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 IGHV4-31P0DP07 118 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 IMPDH2P12268 514 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 CREB1P16220 341 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC25A16P16260 332 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 UQCRC2P22695 453 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 RYKP34925 604 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 EFNA4P52798 201 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 KCNJ10P78508 379 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC25A3Q00325 362 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 MAD2L1Q13257 205 aaPredicted RBP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC17A1Q14916 467 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 SWI5Q1ZZU3 235 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 CYB5R2Q6BCY4 276 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 TNFAIP8L2Q6P589 184 aaPredicted RBP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 DEPDC4Q8N2C3 294 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 RIBC1Q8N443 379 aaPredicted RBP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 C17orf78Q8N4C9 275 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 ZIC4Q8N9L1 334 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 C1orf162Q8NEQ5 155 aaPredicted RBP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 OR4A15Q8NGL6 344 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 ZNF563Q8TA94 476 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 FAM168AQ92567 244 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 CNOT9Q92600 299 aaKnown RBP9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 RAB8BQ92930 207 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 ROPN1LQ96C74 230 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 ZHX1-C8orf76Q96EF9 292 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 NEURL3Q96EH8 262 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 DNAJA3Q96EY1 480 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC35G5Q96KT7 338 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 ZIM3Q96PE6 472 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 KCNK17Q96T54 332 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 AKTIPQ9H8T0 292 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC17A5Q9NRA2 495 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC7A10Q9NS82 523 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 TMEM181Q9P2C4 612 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 POU2F3Q9UKI9 436 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 WDR45Q9Y484 360 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 FLVCR1Q9Y5Y0 555 aa9.33□□□□□ -0.92
CSNK1D-210ENST00000579308 VWC2LB2RUY7 222 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 ZNF208O43345 1280 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 ITM2AO43736 263 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 TYROBPO43914 113 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 EIF1BO60739 113 aaKnown RBP9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 APOBEC3AP31941 199 aaPredicted RBP9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 MAGEA8P43361 318 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 HTR3AP46098 478 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 IDH2P48735 452 aaKnown RBP9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 OR2B6P58173 313 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC35A1P78382 337 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 CASP8Q14790 479 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 ATAD3BQ5T9A4 648 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 TSPO2Q5TGU0 170 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 ANKRD46Q86W74 232 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 LSRQ86X29 649 aaPredicted RBP9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 ARFGAP2Q8N6H7 521 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 PMM1Q92871 262 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 TESCQ96BS2 214 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 BEX2Q9BXY8 128 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 ADAM19Q9H013 955 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 MANSC1Q9H8J5 431 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 PARPBPQ9NWS1 579 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 OSGIN1Q9UJX0 560 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 PCDHGB4Q9UN71 923 aa9.32□□□□□ -0.92
CSNK1D-210ENST00000579308 TMED7-TICAM2A0A0A6YYA0 188 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 TMEM72A0PK05 275 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 AGAP5A6NIR3 686 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 HMGN4O00479 90 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 FAAHO00519 579 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 AP3D1O14617 1153 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 LY6HO94772 140 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 CSF3P09919 207 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 CCNA2P20248 432 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 USF1P22415 310 aaPredicted RBP9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 MPGP29372 298 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 SLC1A3P43003 542 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 POLR2HP52434 150 aaKnown RBP9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 MAP2K6P52564 334 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 CHRNB3Q05901 458 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 KRTAP24-1Q3LI83 254 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 ANXA8L1Q5VT79 327 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 PAQR6Q6TCH4 344 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 HMGN2P46Q86SG4 172 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 CMIPQ8IY22 773 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 ARIH2OSQ8N7S6 290 aa9.31□□□□□ -0.92
CSNK1D-210ENST00000579308 TMEM45BQ96B21 275 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms