RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	IGHV4-31	P0DP07	118 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CCNA2	P20248	432 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FUT4	P22083	530 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	UQCRC2	P22695	453 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HTR2A	P28223	471 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EPHA3	P29320	983 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TACR3	P29371	465 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CALCR	P30988	508 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IL2RG	P31785	369 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TTK	P33981	857 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RYK	P34925	604 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SERPINB5	P36952	375 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RBMX	P38159	391 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IDH2	P48735	452 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CLK3	P49761	638 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF83	P51522	516 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CRYBA2	P53672	197 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HOXC5	Q00444	222 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EPS8	Q12929	822 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HNRNPA0	Q13151	305 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CBFB	Q13951	182 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	VEZF1	Q14119	521 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PPA1	Q15181	289 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZSWIM7	Q19AV6	140 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SMU1	Q2TAY7	513 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM249	Q2WGJ8	235 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FAM174B	Q3ZCQ3	159 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GLIPR1L2	Q4G1C9	344 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC9B1	Q4ZJI4	515 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HIKESHI	Q53FT3	197 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM255A	Q5JRV8	349 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMEM201	Q5SNT2	666 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C6orf52	Q5T4I8	152 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MRPL2	Q5T653	305 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C9orf135	Q5VTT2	229 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C3orf33	Q6P1S2	294 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	WDR93	Q6P2C0	686 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF836	Q6ZNA1	936 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GRINA	Q7Z429	371 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GALNT5	Q7Z7M9	940 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FUNDC1	Q8IVP5	155 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC43A2	Q8N370	569 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF614	Q8N883	585 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CCDC63	Q8NA47	563 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OR4A15	Q8NGL6	344 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SPATA3	Q8NHX4	192 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PNPT1	Q8TCS8	783 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	C10orf105	Q8TEF2	133 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	XAGE5	Q8WWM1	108 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BCL2L2	Q92843	193 aa	Predicted RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GTPBP3	Q969Y2	492 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	DTNBP1	Q96EV8	351 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	MAEL	Q96JY0	434 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC35G5	Q96KT7	338 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SORCS2	Q96PQ0	1159 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	OR52B2	Q96RD2	323 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC35A5	Q9BS91	424 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CACNG6	Q9BXT2	260 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	HDHD5	Q9BXW7	423 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ROPN1B	Q9BZX4	212 aa	Predicted RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	PAIP1	Q9H074	479 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ROPN1	Q9HAT0	212 aa	Predicted RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EXOSC3	Q9NQT5	275 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLC17A5	Q9NRA2	495 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF224	Q9NZL3	707 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NOP53	Q9NZM5	478 aa	Known RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	SLAMF8	Q9P0V8	285 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	KLHL9	Q9P2J3	617 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CHRNA9	Q9UGM1	479 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BTNL2	Q9UIR0	455 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RAB21	Q9UL25	225 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	EDAR	Q9UNE0	448 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FAF1	Q9UNN5	650 aa	Predicted RBP	3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	TMED7	Q9Y3B3	224 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	RAP2C	Q9Y3L5	183 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	WDR45	Q9Y484	360 aa		3.88	□□□□□ -1.79
PPP4R1-209	ENST00000578329	FAM234B	A2RU67	622 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CCDC154	A6NI56	674 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	AQP7P3	A6NL99	342 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329		E9PBE3	544 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329		H7C417	338 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GTPBP1	O00178	669 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	KLF11	O14901	512 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	WNT9B	O14905	357 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BIRC5	O15392	142 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CFLAR	O15519	480 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ZNF500	O60304	480 aa	Predicted RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CYP7B1	O75881	506 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	AKR7A3	O95154	331 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	CPSF4	O95639	269 aa	Known RBP	3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	NUDT14	O95848	222 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IGLV1-44	P01699	117 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	BMP2	P12643	396 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ETFA	P13804	333 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	GGT1	P19440	569 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ATP6V1C1	P21283	382 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	ME2	P23368	584 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IL32	P24001	234 aa		3.87	□□□□□ -1.79
PPP4R1-209	ENST00000578329	IGFBP5	P24593	272 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms