RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 IDH2P48735 452 aaKnown RBP7.26□□□□□ -1.25
COPS3-215ENST00000578317 SESN3P58005 492 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 TAS2R41P59536 307 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 CXADRP78310 365 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 HOXC5Q00444 222 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 TRAM2Q15035 370 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 INPP5JQ15735 1006 aaPredicted RBP7.26□□□□□ -1.25
COPS3-215ENST00000578317 TMEM44Q2T9K0 475 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 NDUFAF6Q330K2 333 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 ZNF766Q5HY98 468 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 OR5M10Q6IEU7 315 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 HMBOX1Q6NT76 420 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 RPUSD3Q6P087 351 aaKnown RBP7.26□□□□□ -1.25
COPS3-215ENST00000578317 DEF8Q6ZN54 512 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 GRINAQ7Z429 371 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 MFSD4AQ8N468 514 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 LINC00471Q8N535 108 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 CATSPER1Q8NEC5 780 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 OR4C15Q8NGM1 316 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 ZBTB8AQ96BR9 441 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 C1GALT1C1Q96EU7 318 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 SLC41A3Q96GZ6 507 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 SH3YL1Q96HL8 342 aaPredicted RBP7.26□□□□□ -1.25
COPS3-215ENST00000578317 MRGPRX4Q96LA9 322 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 ZNF597Q96LX8 424 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 C5orf34Q96MH7 638 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 HS6ST2Q96MM7 605 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 ZNF426Q9BUY5 554 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 FNDC11Q9BVV2 318 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 UBQLN3Q9H347 655 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 DSN1Q9H410 356 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 REEP1Q9H902 201 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 DEPPQ9NTK1 212 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 MED17Q9NVC6 651 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 QPCTLQ9NXS2 382 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 MED11Q9P086 117 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 NKX1-2Q9UD57 310 aaPredicted RBP7.26□□□□□ -1.25
COPS3-215ENST00000578317 BOKQ9UMX3 212 aaPredicted RBP7.26□□□□□ -1.25
COPS3-215ENST00000578317 LYVE1Q9Y5Y7 322 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 NBEAQ8NFP9 2946 aa7.26□□□□□ -1.25
COPS3-215ENST00000578317 BOD1L1Q8NFC6 3051 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 CNTRLQ7Z7A1 2325 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 MED13Q9UHV7 2174 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 CACNA1GO43497 2377 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 TPRP12270 2363 aaKnown RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 USP24Q9UPU5 2620 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 A0A087WUJ7 227 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ARRDC5A6NEK1 342 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 LRRC3CA6NJW4 275 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 C17orf51A8MQB3 221 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 H0Y3Z8 333 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 TNFRSF11BO00300 401 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 CHP2O43745 196 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ZIC3O60481 467 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 CDC40O60508 579 aaKnown RBP eCLIP7.25□□□□□ -1.25
COPS3-215ENST00000578317 DIRAS1O95057 198 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 GADD45GO95257 159 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 F10P00742 488 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 IFNGR1P15260 489 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 PRKCAP17252 672 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 FPR1P21462 350 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 RRM2P31350 389 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 APOBEC1P41238 236 aaKnown RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 RBM34P42696 430 aaKnown RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 YAP1P46937 504 aaKnown RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 DNASE1L1P49184 302 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ARHGDIAP52565 204 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 CDH12P55289 794 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 KCNAB2Q13303 367 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 QPRTQ15274 297 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 TOMM34Q15785 309 aaPredicted RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 ALG10BQ5I7T1 473 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 SHQ1Q6PI26 577 aaKnown RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 PLEKHM3Q6ZWE6 761 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 GDF7Q7Z4P5 450 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 GALNTL5Q7Z4T8 443 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 AMIGO2Q86SJ2 522 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ATG4DQ86TL0 474 aaPredicted RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 HIPK1Q86Z02 1210 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ZDHHC13Q8IUH4 622 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 SVOPLQ8N434 492 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 OR4K17Q8NGC6 315 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 OR5K1Q8NHB7 308 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ZNF563Q8TA94 476 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 SLC7A13Q8TCU3 470 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ACOT11Q8WXI4 607 aaPredicted RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 EXTL1Q92935 676 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 C3orf49Q96BT1 292 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 ZNF524Q96C55 264 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 SPOCK3Q9BQ16 436 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 KLHDC3Q9BQ90 382 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 PSD2Q9BQI7 771 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 PRSS27Q9BQR3 290 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 SLC19A3Q9BZV2 496 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 C8orf4Q9NR00 106 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 MAN2C1Q9NTJ4 1040 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 TUBA8Q9NY65 449 aaPredicted RBP7.25□□□□□ -1.25
COPS3-215ENST00000578317 TAS2R10Q9NYW0 307 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 STOML1Q9UBI4 398 aa7.25□□□□□ -1.25
COPS3-215ENST00000578317 FBXL2Q9UKC9 423 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms