RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 ADAM11O75078 769 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 SLC22A3O75751 556 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 CYP7B1O75881 506 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 LY6G6DO95868 133 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 CHRM4P08173 479 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 IL7RP16871 459 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 IGHV1-2P23083 117 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 PTAFRP25105 342 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 IL12AP29459 219 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 MVDP53602 400 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 ATP5J2P56134 94 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 CAPRIN1Q14444 709 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 DNM1P46Q6ZS02 220 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 SMAP2Q8WU79 429 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 TMEM45BQ96B21 275 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 APH1AQ96BI3 265 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 ARL5BQ96KC2 179 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 ZNF300Q96RE9 604 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 NAA11Q9BSU3 229 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 RMND5AQ9H871 391 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 BARX1Q9HBU1 254 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 ASB6Q9NWX5 421 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 P2RX2Q9UBL9 471 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 OSGIN1Q9UJX0 560 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 SLC9A8Q9Y2E8 581 aa12.8□□□□□ -0.36
SMARCE1-213ENST00000578044 COL6A5A8TX70 2615 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 TMED7-TICAM2A0A0A6YYA0 188 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 IGHV3-15A0A0B4J1V0 119 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 DPRXA6NFQ7 191 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 FZD7O75084 574 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 BCAS1O75363 584 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 MRPL33O75394 65 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 VAMP5O95183 116 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 BMP2P12643 396 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 EPHA3P29320 983 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 IDUAP35475 653 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 IDH2P48735 452 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 CRISP3P54108 245 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 TGFBR3Q03167 851 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 BSPH1Q075Z2 132 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 EPS8Q12929 822 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 SYPL1Q16563 259 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 TMEM108Q6UXF1 575 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 ZNF621Q6ZSS3 439 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 CIARTQ8N365 385 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 ANKFN1Q8N957 763 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 WDR60Q8WVS4 1066 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 CNOT9Q92600 299 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 TLCD1Q96CP7 247 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 ZNF317Q96PQ6 595 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 SMR3AQ99954 134 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 ARMC7Q9H6L4 198 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 LAMP3Q9UQV4 416 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 TMED7Q9Y3B3 224 aa12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 MAGED1Q9Y5V3 778 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-213ENST00000578044 A0A0G2JPF8 293 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 HNRNPCL2B2RXH8 293 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 SHISA9B4DS77 424 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 HNRNPCL3B7ZW38 293 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 HNRNPCL1O60812 293 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 LYZL6O75951 148 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 TGDSO95455 350 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 TFPTP0C1Z6 253 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 HNRNPCL4P0DMR1 293 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 NR2F1P10589 423 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 TFPIP10646 304 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 RNF144AP50876 292 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 NRF1Q16656 503 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 LIN52Q52LA3 116 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 MRPL2Q5T653 305 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 KLHL17Q6TDP4 642 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 ITCHQ96J02 903 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 INPP5KQ9BT40 448 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 TRAF4Q9BUZ4 470 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 RAD21L1Q9H4I0 556 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 WDR55Q9H6Y2 383 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 MANSC1Q9H8J5 431 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 MOV10Q9HCE1 1003 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 BCL2L10Q9HD36 194 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 OBP2BQ9NPH6 170 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 IFT52Q9Y366 437 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 FLVCR1Q9Y5Y0 555 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 ARFGEF3Q5TH69 2177 aa12.78□□□□□ -0.36
SMARCE1-213ENST00000578044 A0A1W2PP18 115 aa12.77□□□□□ -0.37
SMARCE1-213ENST00000578044 FAM234BA2RU67 622 aa12.77□□□□□ -0.37
SMARCE1-213ENST00000578044 ERLIN1O75477 346 aa12.77□□□□□ -0.37
SMARCE1-213ENST00000578044 GPIP06744 558 aa12.77□□□□□ -0.37
SMARCE1-213ENST00000578044 SOD3P08294 240 aa12.77□□□□□ -0.37
SMARCE1-213ENST00000578044 TACR3P29371 465 aa12.77□□□□□ -0.37
SMARCE1-213ENST00000578044 RYKP34925 604 aa12.77□□□□□ -0.37
SMARCE1-213ENST00000578044 ACAA2P42765 397 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms