RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 SENP5Q96HI0 755 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-217ENST00000577897 SLC38A2Q96QD8 506 aa12.78□□□□□ -0.36
SREBF1-217ENST00000577897 CCDC90BQ9GZT6 254 aa12.78□□□□□ -0.36
SREBF1-217ENST00000577897 NECTIN3Q9NQS3 549 aa12.78□□□□□ -0.36
SREBF1-217ENST00000577897 NPDC1Q9NQX5 325 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-217ENST00000577897 LANCL2Q9NS86 450 aa12.78□□□□□ -0.36
SREBF1-217ENST00000577897 RPS6KB2Q9UBS0 482 aa12.78□□□□□ -0.36
SREBF1-217ENST00000577897 RSL24D1Q9UHA3 163 aaKnown RBP12.78□□□□□ -0.36
SREBF1-217ENST00000577897 CPAMD8Q8IZJ3 1885 aa12.78□□□□□ -0.36
SREBF1-217ENST00000577897 INTS1Q8N201 2190 aaKnown RBP12.77□□□□□ -0.36
SREBF1-217ENST00000577897 TCRBV16S1A1N1A0A5B0 115 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 IRGMA1A4Y4 181 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 EFCAB10A6NFE3 127 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 FRG2CA6NGY1 282 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 VSTM2BA6NLU5 285 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 ZAR1LA6NP61 321 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 PTGES3LE9PB15 166 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 E9PLN8 166 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 IGFBP2P18065 325 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 DRD5P21918 477 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 CHMP24386 653 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 RFX3P48380 749 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 CDH15P55291 814 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 COPZ1P61923 177 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 PSG6Q00889 435 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 TSPAN31Q12999 210 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 CCNJQ5T5M9 372 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 MEDAGQ5VYS4 303 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 MBOAT2Q6ZWT7 520 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 BIVMQ86UB2 503 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 CLIP4Q8N3C7 705 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 AMER2Q8N7J2 671 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 ZNF614Q8N883 585 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 OR4D11Q8NGI4 311 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 RHOXF1Q8NHV9 184 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 STT3BQ8TCJ2 826 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 DIO2Q92813 273 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 MPP4Q96JB8 637 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 LCORQ96JN0 433 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-217ENST00000577897 DMRTA2Q96SC8 542 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 VKORC1Q9BQB6 163 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 RNF32Q9H0A6 362 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 LIME1Q9H400 295 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 KLHL1Q9NR64 748 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 RLIMQ9NVW2 624 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 DNAJB12Q9NXW2 375 aaKnown RBP12.77□□□□□ -0.37
SREBF1-217ENST00000577897 C19orf25Q9UFG5 118 aaPredicted RBP12.77□□□□□ -0.37
SREBF1-217ENST00000577897 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.37
SREBF1-217ENST00000577897 SCN2AQ99250 2005 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 NINQ8N4C6 2090 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 IGKV3D-11A0A0A0MRZ8 115 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 GXYLT2A0PJZ3 443 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 E9PQ18 207 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 SCDO00767 359 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 PRRG2O14669 202 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 ONECUT2O95948 504 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 HEXBP07686 556 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 ZGLP1P0C6A0 271 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 MEOX1P50221 254 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 NPTX1Q15818 432 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 CTU2Q2VPK5 515 aaKnown RBP12.76□□□□□ -0.37
SREBF1-217ENST00000577897 SLX4IPQ5VYV7 408 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 B3GNT6Q6ZMB0 384 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 PRSS48Q7RTY5 328 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 PRIMA1Q86XR5 153 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 DOLPP1Q86YN1 238 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 DMRTC2Q8IXT2 367 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-217ENST00000577897 ENTHD1Q8IYW4 607 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 SLC43A2Q8N370 569 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 ZNF615Q8N8J6 731 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 OR8J1Q8NGP2 316 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 CNIH3Q8TBE1 160 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 RORBQ92753 470 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 ZG16BQ96DA0 208 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 HSPBAP1Q96EW2 488 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 FUZQ9BT04 418 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 YIPF3Q9GZM5 350 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 OR8D2Q9GZM6 311 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 HHATLQ9HCP6 504 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 UBQLN4Q9NRR5 601 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 RASSF1Q9NS23 344 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 ST6GALNAC2Q9UJ37 374 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 MKL2Q9ULH7 1088 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 RNF6Q9Y252 685 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 PLEKHA6Q9Y2H5 1048 aa12.76□□□□□ -0.37
SREBF1-217ENST00000577897 GPR55Q9Y2T6 319 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-217ENST00000577897 C2orf92A0A1B0GVN3 265 aa12.75□□□□□ -0.37
SREBF1-217ENST00000577897 TPST2O60704 377 aa12.75□□□□□ -0.37
SREBF1-217ENST00000577897 EPPINO95925 133 aa12.75□□□□□ -0.37
SREBF1-217ENST00000577897 FPR3P25089 353 aa12.75□□□□□ -0.37
SREBF1-217ENST00000577897 IL12BP29460 328 aa12.75□□□□□ -0.37
SREBF1-217ENST00000577897 FMO3P31513 532 aa12.75□□□□□ -0.37
SREBF1-217ENST00000577897 SOX18P35713 384 aa12.75□□□□□ -0.37
SREBF1-217ENST00000577897 RBM34P42696 430 aaKnown RBP12.75□□□□□ -0.37
SREBF1-217ENST00000577897 ST13P50502 369 aaKnown RBP12.75□□□□□ -0.37
SREBF1-217ENST00000577897 SNRPGP62308 76 aaKnown RBP12.75□□□□□ -0.37
SREBF1-217ENST00000577897 ADAM8P78325 824 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms