RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CCDC85BQ15834 202 aaPredicted RBP8.22□□□□□ -1.09
NCBP3-204ENST00000574911 C1QTNF12Q5T7M4 302 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 LAMTOR1Q6IAA8 161 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 SLC35F2Q8IXU6 374 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 CADM2Q8N3J6 435 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 OR14A16Q8NHC5 309 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 THAP4Q8WY91 577 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 HSD17B8Q92506 261 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 RIT1Q92963 219 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 DDOQ99489 341 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 GAS2L1Q99501 681 aaPredicted RBP8.22□□□□□ -1.09
NCBP3-204ENST00000574911 NKX2-4Q9H2Z4 354 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 MKKSQ9NPJ1 570 aaPredicted RBP8.22□□□□□ -1.09
NCBP3-204ENST00000574911 KLHL1Q9NR64 748 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 CLEC1BQ9P126 229 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 DTX4Q9Y2E6 619 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 IER3IP1Q9Y5U9 82 aa8.22□□□□□ -1.09
NCBP3-204ENST00000574911 KIAA0100Q14667 2235 aaKnown RBP8.22□□□□□ -1.09
NCBP3-204ENST00000574911 CDH23Q9H251 3354 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 FANCMQ8IYD8 2048 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.21□□□□□ -1.09
NCBP3-204ENST00000574911 C7orf66A4D0T2 115 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 MCIDASD6RGH6 385 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 CPNE3O75131 537 aaKnown RBP8.21□□□□□ -1.09
NCBP3-204ENST00000574911 ALX3O95076 343 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 UCHL1P09936 223 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 EPXP11678 715 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 ZNF24P17028 368 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 ATF1P18846 271 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 DRD1P21728 446 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 DIO1P49895 249 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 GPR143P51810 404 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 IGLV3-21P80748 117 aaPredicted RBP8.21□□□□□ -1.09
NCBP3-204ENST00000574911 EIF2B5Q13144 721 aaKnown RBP8.21□□□□□ -1.09
NCBP3-204ENST00000574911 HTR4Q13639 388 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 SHHQ15465 462 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 NTRK2Q16620 822 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 UNQ9370/PRO34162Q6UXP9 181 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 DPY19L2P2Q6ZN68 376 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 OVCH1Q7RTY7 1134 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 OOSP2Q86WS3 158 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 ZNF761Q86XN6 746 aaPredicted RBP8.21□□□□□ -1.09
NCBP3-204ENST00000574911 GHDCQ8N2G8 530 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 RCBTB1Q8NDN9 531 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 ZNRF4Q8WWF5 429 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 YIPF5Q969M3 257 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 MRPL38Q96DV4 380 aaKnown RBP8.21□□□□□ -1.09
NCBP3-204ENST00000574911 RBCK1Q9BYM8 510 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 TTTY10Q9BZA0 68 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 RPS6KB2Q9UBS0 482 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 POMT2Q9UKY4 750 aa8.21□□□□□ -1.09
NCBP3-204ENST00000574911 ATG2BQ96BY7 2078 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 A0A087WUJ7 227 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 ANKRD61A6NGH8 418 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SMLR1H3BR10 107 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 ARHGEF9O43307 516 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 CTNSO60931 367 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 GATBO75879 557 aaKnown RBP8.21□□□□□ -1.1
NCBP3-204ENST00000574911 UBL3O95164 117 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.1
NCBP3-204ENST00000574911 PRKCAP17252 672 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SRP9P49458 86 aaKnown RBP8.21□□□□□ -1.1
NCBP3-204ENST00000574911 MMP15P51511 669 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 PSMD4P55036 377 aaKnown RBP8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SIRPAP78324 504 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 PITPNAQ00169 270 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SRSF5Q13243 272 aaKnown RBP8.21□□□□□ -1.1
NCBP3-204ENST00000574911 PRTGQ2VWP7 1150 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 DEFB110Q30KQ9 67 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 THOC7Q6I9Y2 204 aaKnown RBP8.21□□□□□ -1.1
NCBP3-204ENST00000574911 RPL22L1Q6P5R6 122 aaKnown RBP8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SLITRK4Q8IW52 837 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 CMIPQ8IY22 773 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 LRRC17Q8N6Y2 441 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 NPEPL1Q8NDH3 523 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 DEDD2Q8WXF8 326 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SCMH1Q96GD3 660 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 SPACA7Q96KW9 195 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 DPAGT1Q9H3H5 408 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 GHITMQ9H3K2 345 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 NCDNQ9UBB6 729 aa8.21□□□□□ -1.1
NCBP3-204ENST00000574911 A0A0A6YYC8 382 aaPredicted RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 A0A1W2PPK0 400 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 TCRBV21S2A2A0A5A6 115 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 EFCAB7A8K855 629 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 I3L1I5 382 aaPredicted RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 GNB5O14775 395 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 FLRT2O43155 660 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 AKR7A2O43488 359 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 PPM1BO75688 479 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 ARL6IP5O75915 188 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 SEMA4FO95754 770 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 DHFRP00374 187 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 GABRG2P18507 467 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 NAA10P41227 235 aaPredicted RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 LGALS3BPQ08380 585 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 MRPL28Q13084 256 aaKnown RBP8.2□□□□□ -1.1
NCBP3-204ENST00000574911 FCN2Q15485 313 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 ISXQ2M1V0 245 aa8.2□□□□□ -1.1
NCBP3-204ENST00000574911 BTBD16Q32M84 506 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms