RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 KRCC1Q9NPI7 259 aaPredicted RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 UBAP1Q9NZ09 502 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 B4GALT7Q9UBV7 327 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 CHRNA9Q9UGM1 479 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 ORC6Q9Y5N6 252 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM8BA6NDV4 472 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 EFNA2O43921 213 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 TRAPPC6AO75865 159 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 EIF1P41567 113 aaKnown RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 CTBP2P56545 445 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM154Q6P9G4 183 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 KLHL17Q6TDP4 642 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 UGT2A3Q6UWM9 527 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 GTPBP8Q8N3Z3 284 aaPredicted RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 ZFP62Q8NB50 900 aaPredicted RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 FAM83FQ8NEG4 500 aaPredicted RBP21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 OR14L1PQ8NHC6 308 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 GNPDA2Q8TDQ7 276 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 OR11A1Q9GZK7 315 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 TOR3AQ9H497 397 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 BATF3Q9NR55 127 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 POFUT2Q9Y2G5 429 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 PCDHGB6Q9Y5F9 930 aa21.74■■□□□ 1.07
ATPAF1-213ENST00000574428 CDC42EP2O14613 210 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 GLSO94925 669 aaPredicted RBP21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 ITGB2P05107 769 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 FUT1P19526 365 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM44Q2T9K0 475 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 NHSL2Q5HYW2 709 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 CHERPQ8IWX8 916 aaKnown RBP21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 KTI12Q96EK9 354 aaPredicted RBP21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 MBOAT4Q96T53 435 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 SLC19A3Q9BZV2 496 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 UCK2Q9BZX2 261 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM185BQ9H7F4 350 aa21.73■■□□□ 1.07
ATPAF1-213ENST00000574428 LRRN3E7EW58 273 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 KLF4O43474 513 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 PEPDP12955 493 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 MAGEA5P43359 124 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 GSSP48637 474 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 RAD23AP54725 363 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 PMP22Q01453 160 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 C1QL3Q5VWW1 255 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM251Q8N6I4 163 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 RIBC2Q9H4K1 309 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 TMEM5Q9Y2B1 443 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 TP53TG5Q9Y2B4 290 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 PCDHGB5Q9Y5G0 923 aa21.72■■□□□ 1.07
ATPAF1-213ENST00000574428 OR2M5A3KFT3 312 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 A8MVM7 634 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 CELA3AP09093 270 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 FPR3P25089 353 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 ADH6P28332 368 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 POLR2IP36954 125 aaKnown RBP21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 TSPAN31Q12999 210 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 CDK20Q8IZL9 346 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 KDF1Q8NAX2 398 aaPredicted RBP21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 MFRPQ9BY79 579 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 OR2B2Q9GZK3 357 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 H3BML4 177 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 SOX14O95416 240 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 OPN1LWP04000 364 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 SAGP10523 405 aaPredicted RBP21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 ZNF17P17021 662 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 RPS5P46782 204 aaKnown RBP21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 CHN2P52757 468 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 PPIAP62937 165 aaKnown RBP21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 ZNF169Q14929 603 aaPredicted RBP21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 WIPI1Q5MNZ9 446 aaPredicted RBP21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 SGTBQ96EQ0 304 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 SERINC1Q9NRX5 453 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 REV1Q9UBZ9 1251 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 SCOCQ9UIL1 159 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 PCDHGB7Q9Y5F8 929 aa21.71■■□□□ 1.07
ATPAF1-213ENST00000574428 EFCAB9A8MZ26 197 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 NPIPB7O75200 414 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 CH25HO95992 272 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 IGFBP1P08833 259 aaPredicted RBP21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 FAM87AP0C7U9 286 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 B3GALT5-AS1P59052 145 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 HYAL4Q2M3T9 481 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 RFX4Q33E94 735 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 GLYR1Q49A26 553 aaPredicted RBP21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 RNFT1Q5M7Z0 435 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 C3orf33Q6P1S2 294 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 TMPRSS11FQ6ZWK6 438 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 C10orf53Q8N6V4 93 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 RBMXL3Q8N7X1 1067 aaKnown RBP21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 CYGBQ8WWM9 190 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 TAAR8Q969N4 342 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 RDH12Q96NR8 316 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 PIGQQ9BRB3 760 aa21.7■■□□□ 1.06
ATPAF1-213ENST00000574428 TFPIP10646 304 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 EPHA2P29317 976 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 SELENBP1Q13228 472 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 C1orf140Q5VVS0 124 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 CD300LDQ6UXZ3 194 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 SLC22A16Q86VW1 577 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 PARP8Q8N3A8 854 aa21.69■■□□□ 1.06
ATPAF1-213ENST00000574428 LRRC17Q8N6Y2 441 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms