RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 LTBQ06643 244 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 BSPH1Q075Z2 132 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 EPS8Q12929 822 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 GTDC1Q4AE62 458 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 RPS26P11Q5JNZ5 115 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 BEND6Q5SZJ8 279 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 NCMAPQ5T1S8 102 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ADAM5Q6NVV9 412 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 PRSS57Q6UWY2 283 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF836Q6ZNA1 936 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 MSANTD1Q6ZTZ1 278 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 VRK2Q86Y07 508 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ADGRG3Q86Y34 549 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 CCDC103Q8IW40 242 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF440Q8IYI8 595 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 CADM2Q8N3J6 435 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 OR52P1PQ8NH57 321 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 LRRC8CQ8TDW0 803 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 DYDC1Q8WWB3 177 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF75CPQ92670 426 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 GTPBP3Q969Y2 492 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 VPS33AQ96AX1 596 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 AURKBQ96GD4 344 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 MAELQ96JY0 434 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 OR52B2Q96RD2 323 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 TMEM204Q9BSN7 226 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 NAA11Q9BSU3 229 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ALG2Q9H553 416 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ARMC7Q9H6L4 198 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 TPT1P8Q9HAU6 139 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC6A13Q9NSD5 602 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 TMEM181Q9P2C4 612 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 OSGIN1Q9UJX0 560 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 USH1CQ9Y6N9 552 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 NSD1Q96L73 2696 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 IGKV3D-15A0A087WSY6 115 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 TRIM64A6NGJ6 449 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 TRIM64BA6NI03 449 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF716A6NP11 495 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 C5orf58C9J3I9 102 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 KLF11O14901 512 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF208O43345 1280 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 EIF1BO60739 113 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 CNOT4O95628 575 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 COX5AP20674 150 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 IGHV1-2P23083 117 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 IDUAP35475 653 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 CDH11P55287 796 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 FAPQ12884 760 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 LARS2Q15031 903 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 PDK3Q15120 406 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 TIMM23BQ5SRD1 257 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 AGBL2Q5U5Z8 902 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 FBXW9Q5XUX1 488 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 MAVSQ7Z434 540 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 LSRQ86X29 649 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 GOLGA6L1Q8N7Z2 621 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 OR52N5Q8NH56 324 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 PMM1Q92871 262 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 NEUROG1Q92886 237 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 TRMT61AQ96FX7 289 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 TMEM19Q96HH6 336 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 COX4I2Q96KJ9 171 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 RAD21L1Q9H4I0 556 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 TCF7L2Q9NQB0 619 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 SDR39U1Q9NRG7 319 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 RLIMQ9NVW2 624 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 ASB6Q9NWX5 421 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 THUMPD1Q9NXG2 353 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 UPB1Q9UBR1 384 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 POU2F3Q9UKI9 436 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 TRAPPC4Q9Y296 219 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF443Q9Y2A4 671 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC9A8Q9Y2E8 581 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 CR1P17927 2039 aa8.53□□□□□ -1.04
NPLOC4-212ENST00000573328 A0A1W2PR80 420 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 ZC3H12DA2A288 527 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 FAM234BA2RU67 622 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 CDHR4A6H8M9 788 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 NR5A2O00482 541 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 FAAHO00519 579 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 ABCD4O14678 606 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 RAMP1O60894 148 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 TMCC2O75069 709 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 GPIP06744 558 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 HEXAP06865 529 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 ZCCHC18P0CG32 403 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 IMPDH2P12268 514 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 GTF2E2P29084 291 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 CDKN1AP38936 164 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 CEACAM7Q14002 265 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 VEZF1Q14119 521 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 OR7A5Q15622 319 aa8.52□□□□□ -1.05
NPLOC4-212ENST00000573328 ZNF672Q499Z4 452 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms