RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 GDI2P50395 445 aaKnown RBP10.31□□□□□ -0.76
RPAIN-212ENST00000573126 NRG3P56975 720 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 ACTC1P68032 377 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 ACTA1P68133 377 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 HHEXQ03014 270 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 ZNF267Q14586 743 aaPredicted RBP10.31□□□□□ -0.76
RPAIN-212ENST00000573126 TPRA1Q86W33 373 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 OOSP2Q86WS3 158 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 OR4C3Q8NH37 302 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 ZPLD1Q8TCW7 415 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 HSD17B8Q92506 261 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 OR14A2Q96R54 314 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 TRIM2Q9C040 744 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 SLA2Q9H6Q3 261 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 POLE3Q9NRF9 147 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 ACOXLQ9NUZ1 547 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 HAO2Q9NYQ3 351 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 CLEC1BQ9P126 229 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 RPS6KB2Q9UBS0 482 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 GNG8Q9UK08 70 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 TNFP01375 233 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 CD53P19397 219 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 GRPRP30550 384 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 BTCP35070 178 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 BTG2P78543 158 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 TRAM1Q15629 374 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 NTRK2Q16620 822 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 PLA1AQ53H76 456 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 NPSR1Q6W5P4 371 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 MS4A15Q8N5U1 240 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 METTL27Q8N6F8 245 aaPredicted RBP10.31□□□□□ -0.76
RPAIN-212ENST00000573126 LSMEM1Q8N8F7 131 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 GATSQ8NAP1 163 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 OR6K6Q8NGW6 343 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 ZFAND1Q8TCF1 268 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 GPBAR1Q8TDU6 330 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 SNX33Q8WV41 574 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 AKAP1Q92667 903 aaKnown RBP eCLIP10.31□□□□□ -0.76
RPAIN-212ENST00000573126 VSTM2LQ96N03 204 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 BRD7Q9NPI1 651 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 LRIT1Q9P2V4 623 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 BAIAP2Q9UQB8 552 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 CACNG2Q9Y698 323 aa10.31□□□□□ -0.76
RPAIN-212ENST00000573126 A0A0A6YYJ9 748 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 OR5K3A6NET4 321 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 FAM171A2A8MVW0 826 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 NDUFB2O95178 105 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SEMA4FO95754 770 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 GABRG2P18507 467 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 AHCYP23526 432 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 PSMB10P40306 273 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 RBM34P42696 430 aaKnown RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 YPEL5P62699 121 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 DGCR2P98153 550 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 GALK2Q01415 458 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 MANEAQ5SRI9 462 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 TIGD3Q6B0B8 471 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 ULK3Q6PHR2 472 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 GRAMD2AQ8IUY3 354 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 PHF21AQ96BD5 680 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SMIM19Q96E16 107 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 CNN2Q99439 309 aaKnown RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 ORAI3Q9BRQ5 295 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 AK6Q9Y3D8 172 aaKnown RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 OR10H1Q9Y4A9 318 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SLCO1B1Q9Y6L6 691 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 ALPK2Q86TB3 2170 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 TRBV2A0A0J9YWF9 115 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 C4orf47A7E2U8 309 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 CENPBD1B2RD01 187 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 IDSB3KWA1 339 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 B4DGG1 531 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SELENOFO60613 162 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 TRIM3O75382 744 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SOX30O94993 753 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 CSTAP01040 98 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 C1QBP02746 253 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 MAOAP21397 527 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 POU4F2Q12837 409 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 MAB21L1Q13394 359 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 CDK5R1Q15078 307 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 BTBD16Q32M84 506 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 FAM205BPQ63HN1 556 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 PYHIN1Q6K0P9 492 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 TMEM184AQ6ZMB5 413 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 PARGQ86W56 976 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 IZUMO1Q8IYV9 350 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SLC2A12Q8TD20 617 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 HOXB13Q92826 284 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 PMM1Q92871 262 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 RASD2Q96D21 266 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 MRPL38Q96DV4 380 aaKnown RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 LMF1Q96S06 567 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 LMF2Q9BU23 707 aaKnown RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 GSDMCQ9BYG8 508 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 LMAN2LQ9H0V9 348 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SYNDIG1Q9H7V2 258 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 MKKSQ9NPJ1 570 aaPredicted RBP10.3□□□□□ -0.76
RPAIN-212ENST00000573126 SERTAD3Q9UJW9 196 aa10.3□□□□□ -0.76
RPAIN-212ENST00000573126 COPS3Q9UNS2 423 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms